Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_4052 |
Symbol | |
ID | 5060534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4607784 |
End bp | 4609337 |
Gene Length | 1554 bp |
Protein Length | 517 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640476313 |
Product | NADH dehydrogenase subunit N |
Protein accession | YP_001160860 |
Protein GI | 145596563 |
COG category | [C] Energy production and conversion |
COG ID | [COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) |
TIGRFAM ID | [TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGAGC TGAAGCTTCC GTCGATCGAC TACGCGGCGC TCGCGCCGAC GCTCATCCTG CTGGGCGCCG CTCTGGTCGG TGTCCTGGTC GAGGCGTTCG TGCCGCGCCG GCTGCGGCAC GTGGTGCAGC TCACGGTAGC GCTGCTGGCG GTGCTCGGCG CGCTGACCAT GGTGGTGTTG AACGCCAATG ACCGTCTGAT CACCATCGGT GGGGCGATCG CCATCGATGG ACCGGCGCTC TTCCTGCAGG GCGCGATCCT GGTGCTGGCC GCGATGGCCC TGCTGCTCAT CGGGGAGCGT ACGGTCGAGC GCGGCGGGGC GTTCGTGGCT CAGGCGGCGG TGACCGCCGA GTCGGCGGAC GACCGTCGGC AGGCCGAAGG GGCCCCCGGT CTGACCGAGG TGTACCCGCT GACCAGCTTC GCGGTCGGGG GCATGCTGAT CTTCGTGGCG GCGAACGACC TGCTGACCAT GTTCATCGCG CTCGAGGTCT TCTCGCTTCC GCTCTACCTG CTCTGCGCGC TGGCTCGCCG TCGGCGGCTG CTGAGCCAGG AGGCGGCGAT GAAGTACTTC CTGCTCGGCG CGTACGCCTC GGCGTTCTTC CTCTTCGGCG TCGCGTTGGT GTACGGCTTC ACCGCCGGCA TCCCCGACCG TGCGGCGGGG GTTGACTTCG CCACCATCCA CGCGGCGGTC GCGGAGAGCC CGTCCAGCTC GGTGCTGCTC TTCGGCGGTA TGGCGCTGAT CGCTATCGGC CTGCTGTTCA AGGCCGGCGC CGCGCCGTTC CACGTCTGGA CGCCGGACGT CTACCAGGGG GCGCCCACCC CGATCACCGG CTTCATGGCA GCCTGCACGA AGGTCGCGGC GTTCGGTGCC CTGCTGCGGG TCTTCCACGT CGCCTTCGAG GGGGCCCGCT GGGACTTCAC TCCGATCCTC GGCGTGGTAG CGGTGCTGAC CATGCTCGTC GGGGCAGTGC TGGCGGTCAC CCAGACCGAC ATCAAGCGGC TGCTCGCGTA CTCCTCGATC GCCAACGCGG GGTATCTGCT GGTCGGGGTG CTCGCGCCGA CCAGCGAAGG GGTCTCCGGG ACGATGTTCT ACCTGGTCGC CTACGGCTTC TCGGTGCTGG CCGCGTTCGC CGTGGTCACC CTGGTCCGGG ACGCGGACGG CGAGGCCACC CACCTGTCCC GCTGGGCGGG TCTGGGCCAG CGCTCCCCCT TCTATGCCGG GCTGTTCACC TTCATCCTGC TCGCCTTCGC CGGTATTCCG TTGACCAGCG GATTCACGAG CAAGTTCGCG GTCTTCAGCG CGGCGTTCGA CGGTGGTCAG GGTTGGTTGG TGATCGCCGG CGTGCTGACC AGCATGGTGC TCGCCTTCCC GTATCTGCGG GTGGTCGTGC TGATGTGGCT CTCCGAGCCC GGCGAGTCCA CTCCCGCCGT CGTCGTGCCG GGCTGGCTGA CCTCGGCCGC GCTGACGATC GGTGTGGTCG CCACCTTGGC GCTCGGGGTG TTTCCGGACC CGCTGCTCGA TCTCGCCGCG GGAGCCGCAG AGTTCGTGCG GTGA
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Protein sequence | MSELKLPSID YAALAPTLIL LGAALVGVLV EAFVPRRLRH VVQLTVALLA VLGALTMVVL NANDRLITIG GAIAIDGPAL FLQGAILVLA AMALLLIGER TVERGGAFVA QAAVTAESAD DRRQAEGAPG LTEVYPLTSF AVGGMLIFVA ANDLLTMFIA LEVFSLPLYL LCALARRRRL LSQEAAMKYF LLGAYASAFF LFGVALVYGF TAGIPDRAAG VDFATIHAAV AESPSSSVLL FGGMALIAIG LLFKAGAAPF HVWTPDVYQG APTPITGFMA ACTKVAAFGA LLRVFHVAFE GARWDFTPIL GVVAVLTMLV GAVLAVTQTD IKRLLAYSSI ANAGYLLVGV LAPTSEGVSG TMFYLVAYGF SVLAAFAVVT LVRDADGEAT HLSRWAGLGQ RSPFYAGLFT FILLAFAGIP LTSGFTSKFA VFSAAFDGGQ GWLVIAGVLT SMVLAFPYLR VVVLMWLSEP GESTPAVVVP GWLTSAALTI GVVATLALGV FPDPLLDLAA GAAEFVR
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