Gene Strop_4048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4048 
Symbol 
ID5060530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4602120 
End bp4602800 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content65% 
IMG OID640476309 
Producthypothetical protein 
Protein accessionYP_001160856 
Protein GI145596559 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.293698 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.899235 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGCT TCTTCGACTT ACCTCCCGCG AAAGGCAAAA AGATGCACGT GGTCCCCGGG 
CTCAAGGTGC TGTACTTCGG GACACCGGTG GTGCTGATCA GCTCACGTAA CGAGGACGGC
ACCGCGAACC TCGCCCCGAT GTCCTCCGCC TGGTGGCTGG GCCAGTCCTG CATGCTCGGT
CTCGGCAACA GTGGCCAGAC GACGGCGAAC CTGCTGCGCG AACGCGAATG TGTGCTCAAC
CTGCCCTCGT CGGCGATGGT CGACGCCGTT GACCGGATCG CCCTCACCAC CGGAAAATCG
GCCGTGCCGG ACCACAAGGC AAAGCAGGGC TACCGGTACG AGCCGGACAA GTTCTCAGCC
GCGCAGCTGA CCGAGCAGAC CTCGGAGCTG GTCCGGGCGC CCCGGGTCGC GGAATGTCCG
GTCCAGCTGG AGTGCCGGGT CGTCTCGACG CACCCCTTTG GCGGCCCCAC CCCGCATGCC
ACCGCCTTCC AGGTCGAGGT CCTTCGCGCC CACGTTGAGG AGGGCCTGAT CATTCCGGGG
ACGCACTACG TAGATCCACT CGGATGGGAC CCACTCATCA TGAAATTCTG CGAGTTCTTC
GGCGGTGGAC ACAACGTGCA TCCGTCGAAA CTCGCCGAAG GCTGGAACAT GCCGCATCAA
CTCCAGCCGG CGGCCATCTG A
 
Protein sequence
MASFFDLPPA KGKKMHVVPG LKVLYFGTPV VLISSRNEDG TANLAPMSSA WWLGQSCMLG 
LGNSGQTTAN LLRERECVLN LPSSAMVDAV DRIALTTGKS AVPDHKAKQG YRYEPDKFSA
AQLTEQTSEL VRAPRVAECP VQLECRVVST HPFGGPTPHA TAFQVEVLRA HVEEGLIIPG
THYVDPLGWD PLIMKFCEFF GGGHNVHPSK LAEGWNMPHQ LQPAAI