Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_4048 |
Symbol | |
ID | 5060530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4602120 |
End bp | 4602800 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640476309 |
Product | hypothetical protein |
Protein accession | YP_001160856 |
Protein GI | 145596559 |
COG category | [R] General function prediction only |
COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.293698 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.899235 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAGCT TCTTCGACTT ACCTCCCGCG AAAGGCAAAA AGATGCACGT GGTCCCCGGG CTCAAGGTGC TGTACTTCGG GACACCGGTG GTGCTGATCA GCTCACGTAA CGAGGACGGC ACCGCGAACC TCGCCCCGAT GTCCTCCGCC TGGTGGCTGG GCCAGTCCTG CATGCTCGGT CTCGGCAACA GTGGCCAGAC GACGGCGAAC CTGCTGCGCG AACGCGAATG TGTGCTCAAC CTGCCCTCGT CGGCGATGGT CGACGCCGTT GACCGGATCG CCCTCACCAC CGGAAAATCG GCCGTGCCGG ACCACAAGGC AAAGCAGGGC TACCGGTACG AGCCGGACAA GTTCTCAGCC GCGCAGCTGA CCGAGCAGAC CTCGGAGCTG GTCCGGGCGC CCCGGGTCGC GGAATGTCCG GTCCAGCTGG AGTGCCGGGT CGTCTCGACG CACCCCTTTG GCGGCCCCAC CCCGCATGCC ACCGCCTTCC AGGTCGAGGT CCTTCGCGCC CACGTTGAGG AGGGCCTGAT CATTCCGGGG ACGCACTACG TAGATCCACT CGGATGGGAC CCACTCATCA TGAAATTCTG CGAGTTCTTC GGCGGTGGAC ACAACGTGCA TCCGTCGAAA CTCGCCGAAG GCTGGAACAT GCCGCATCAA CTCCAGCCGG CGGCCATCTG A
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Protein sequence | MASFFDLPPA KGKKMHVVPG LKVLYFGTPV VLISSRNEDG TANLAPMSSA WWLGQSCMLG LGNSGQTTAN LLRERECVLN LPSSAMVDAV DRIALTTGKS AVPDHKAKQG YRYEPDKFSA AQLTEQTSEL VRAPRVAECP VQLECRVVST HPFGGPTPHA TAFQVEVLRA HVEEGLIIPG THYVDPLGWD PLIMKFCEFF GGGHNVHPSK LAEGWNMPHQ LQPAAI
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