| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4047 |
|---|
| Symbol | |
|---|
| ID | 5060529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 4601366 |
|---|
| End bp | 4601833 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640476308 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001160855 |
|---|
| Protein GI | 145596558 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1950] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.183726 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.627551 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGTTCCA GGCCGAGGCT TCCCCGGAAG ACAGGACCCG AGCCTTCCCT GGAGGAACGG
TCCGTGGCAG CATTCTCCGC CATGGGTTTC CTGAAAGGGC TCCTGATCCG GTTGGGCTCC
ACAGCGGTTG CCTTCTGGCT GGCCACGCTT CTGATCCCGG GCATCACGCT GGATGCGACG
TCGGCCACTG AGACAGTCAC CACGCTGATC CTCGTCGCCG CGATCTTCGG CGTCGTCAAC
GCGGTGCTCC AGCCAGTCAT CAGGACCGTG GGCTGCGGCT TCTACCTCCT CACTCTCGGG
TTGATCGCGC TGGTCGTCAA CGGTCTACTG TTCCTGCTGA CCAGTTGGAT CGCGGGCGAG
GCCGGACTGC CCTTCAACGT GAACGGGTTC TGGCCAGCCG CCGTCCTCGG CGCGCTCCTC
GTCGGTGTGG TCACCTGGCT ACTCGGAGCC GTCTTCGACC GCGACTAG
|
|---|
| Protein sequence | MGSRPRLPRK TGPEPSLEER SVAAFSAMGF LKGLLIRLGS TAVAFWLATL LIPGITLDAT
SATETVTTLI LVAAIFGVVN AVLQPVIRTV GCGFYLLTLG LIALVVNGLL FLLTSWIAGE
AGLPFNVNGF WPAAVLGALL VGVVTWLLGA VFDRD
|
|---|
| |