| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4033 |
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| Symbol | |
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| ID | 5060515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 4585050 |
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| End bp | 4587458 |
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| Gene Length | 2409 bp |
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| Protein Length | 802 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640476294 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001160841 |
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| Protein GI | 145596544 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.338213 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCTCCG ACAGCCCGGC GCCCCGGCCG CGGCGCCCCG GCCGGCCGCC GTCACCCACG
GCCACCCGCG CCGCAGCCCC CGGGCCGTCC CCGACAGAGC TGCTGGGCCA GCTACGCGCC
CGGCATGACG CCGACCCGGT AACCCACGTC GAACGGGTAC CCGCCCGCGC CGGCGAGCCC
GCGCCGTGGC CCAGCTGGGT CCCGGCGGAT CTGCACGCGG CGTTCACCCG GCAGGGCGTG
GAGACACCGT GGCAGCACCA GGCCGAAGCC GCCGATCTCG CCCACACCGG CAGCCACGTC
GTCGTCGCCA CCGGCACGGC ATCCGGCAAG TCCCTGGCCT ACCAGCTCCC GGCGCTGTCA
ACGCTGCTCA CCGACCCCCG CGCCACCGTG CTCTACCTCG CTCCCACCAA AGCACTCGCT
GTTGACCAGC TACGGGCCAT CACCGAGCTG GAGCTGGACG GAGTACGCCC CGCCTGCTAC
GACGGAGACA CCCCCCGGGC CGAACGGGAA TGGATCCGGC AGCACGCGCG GTTCGTGCTG
ACCAACCCCG ACATGCTCCA CCACGGCATC CTGCCCGGCC ATGCCCAGTG GACGAGGTTC
CTCCGCCGGC TCGCGTACGT GGTGGTGGAC GAGTGCCACA GCTACCGGGG CGTCTTCGGC
TCGCAGGTGG CGCACGTGCT GCGCCGACTG CGCCGGCAGT GCACTCGGAT CGGCCGTACG
CCGGTCTTCG TGCTGGCCTC CGCCACCTCG GGTGACCCGG CCGTGACGGC CGAACGACTC
ACCGGCCTGC CCGTGGCGGC GGTCACCGGA GACACCTCGC CCCGCGGCGG GGTGACCTTC
GCGCTGTGGG AGCCGCCGAC GCTGCCCACC CCGACCACCT CCCCCGACGA CACCGACCTC
GCGCCGGTAC GTCGATCCGC GCTGCGAGAA ACCGCCGACC TGCTCGCCGA CGCGGTGGCC
GCGGGGGTCC GCACGCTCGC CTTCGTCCGG TCCCGACGGG GGGCCGAGGC GGTGGCCGCC
AACGCCCGCC GGGCCCTCGA CGAGGCGGTA TCCGGGCTGG GTAACCAGGT GGCCGCCTAC
CGCGCCGGCT ACCTGCGCGA GGAGCGACGC GAACTGGAAC GGTCCCTCCT CAGCGGTGAG
CTGCGCGGAC TCGCCTCAAC CAACGCCCTC GAACTCGGCG TCGACCTGGT CGGGCTGGAC
GCGGTGCTGA TCTGCGGCTA CCCCGGCACC CGCGCCTCGC TCTGGCAGCA GGCCGGGCGG
GCCGGACGCT CCGGCCAGGA GGCGCTGGCG GTGCTGGTCG CCCGGGACGA TCCGCTCGAC
AGCTACCTCG TCCACCACCC CGAGGCGGTC TTCGGGGCAC CGGTCGAGGC GACCGTGCTC
GACCCCACCA ATCCGTACGT GCTCGGGCCG CAGCTCGCCT GCGCCGCCGC CGAGGCACCA
CTCACCCCGG CCGACCTGGA CCTGTTCGGG GACGGCGCGA AAGAGGCGGT GGACGCTCTG
GTCGAGGCCG GTGCGCTCCG ACAGCGCCCC ACCGGGTGGT ACTGGCGCCA CCGCGAGCGC
CCCCAGGTGG AGCTACGCGG CGGAGACGGC GCACCGATCT GCGTGGTGGA GACGGCGACC
GGGCGGCTGC TCGGCACGGT CGACGGCGGG TCGTCGCACT TCCTGCTGCA TCCCGGGGCG
GTCTACCTGC ACCAGGGCGT CTCGTACGTG GTCGACACCC TCGACCTCGC CGACGGGTGC
GCGCTGGTGC ACCCCGAGGA GCCGGACTGG TCCACCCATG CCCGCGATGT CACGTCGCTG
TCGGTGGTGG CGGTCCGGTC GTACGTGGAC GCCGGACCGG TCGGGCTCTT TCTCGGTGAG
GTCGACGTGA CCAGCCAGGT GGTGTCCTAC CAGCGACGCC GAATTGCCAC CGGCGAGGTC
ATCGACACCC GCCCCCTGGA CCTACCCGCC CGGGAGCTGC GAACCGTGGC GGTGTGGTTC
ACGCTCTCGC CGGAGTCCCT CACCGCGAGT GGAGTCGACC CGGCCGACGT GCCGGGCGCG
CTGCACGCCG CCGAGCACGC CGCGATCGGG TTGCTGCCGC TGACCGCCAC CTGCGACCGG
TGGGACATCG GCGGCTTGTC AACCGCGATG CATCCCGACA CCGGGGCACC GACCGTCTTC
GTCTACGACG GCCACTCCGG CGGGGCCGGC TTCGCCGAGC GGGCGTATGC AACGGCGGCG
ACATGGCTCC GGGCTACCCG GGATGTGGTC ACGGACTGTG GCTGCGAGTT CGGCTGCCCG
TCCTGCGTCC AGTCCCCGAA GTGCGGCAAC GGCAACAATC CACTGTCCAA GCCGGACGCG
GTCCGGGTCC TCGACGTCGT ACTGGCCAAC CTGCCATCCG GAACGGTTCA GGCCAGCCGG
GCGTCCTGA
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| Protein sequence | MTSDSPAPRP RRPGRPPSPT ATRAAAPGPS PTELLGQLRA RHDADPVTHV ERVPARAGEP
APWPSWVPAD LHAAFTRQGV ETPWQHQAEA ADLAHTGSHV VVATGTASGK SLAYQLPALS
TLLTDPRATV LYLAPTKALA VDQLRAITEL ELDGVRPACY DGDTPRAERE WIRQHARFVL
TNPDMLHHGI LPGHAQWTRF LRRLAYVVVD ECHSYRGVFG SQVAHVLRRL RRQCTRIGRT
PVFVLASATS GDPAVTAERL TGLPVAAVTG DTSPRGGVTF ALWEPPTLPT PTTSPDDTDL
APVRRSALRE TADLLADAVA AGVRTLAFVR SRRGAEAVAA NARRALDEAV SGLGNQVAAY
RAGYLREERR ELERSLLSGE LRGLASTNAL ELGVDLVGLD AVLICGYPGT RASLWQQAGR
AGRSGQEALA VLVARDDPLD SYLVHHPEAV FGAPVEATVL DPTNPYVLGP QLACAAAEAP
LTPADLDLFG DGAKEAVDAL VEAGALRQRP TGWYWRHRER PQVELRGGDG APICVVETAT
GRLLGTVDGG SSHFLLHPGA VYLHQGVSYV VDTLDLADGC ALVHPEEPDW STHARDVTSL
SVVAVRSYVD AGPVGLFLGE VDVTSQVVSY QRRRIATGEV IDTRPLDLPA RELRTVAVWF
TLSPESLTAS GVDPADVPGA LHAAEHAAIG LLPLTATCDR WDIGGLSTAM HPDTGAPTVF
VYDGHSGGAG FAERAYATAA TWLRATRDVV TDCGCEFGCP SCVQSPKCGN GNNPLSKPDA
VRVLDVVLAN LPSGTVQASR AS
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