Gene Strop_4031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4031 
Symbol 
ID5060513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4584131 
End bp4584559 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content70% 
IMG OID640476292 
Producthypothetical protein 
Protein accessionYP_001160839 
Protein GI145596542 
COG category[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.387784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCCGTC TCTCTTTCTC GCCCGCGCCG GTGCATGTCC GCACGGCGCG GTTGGTCGGT 
GTCGCCGTGG CGCGGCGCGC GGGGGTCCGA CAGGGCCTGC TGGACGAGGT GCGACTGGCG
ATCGGTGAGG CGTGTACCCG GGCGGTGGCG TTGCACCAGC AGTACAACCT TTCTGACCCA
GTGCGGGTTG AGATGTCCGA TTCTGGGACG TATGCCGTTC GGGTGGTGGA CCGGGCGCCG
CTCGAGGCCG GAGCCGATCT TGCGGCGTTG CCGCCGTACG AACTGGCCCG GGAGTCACTC
AGCGAGGATG CGTTGACCAC CGGCGTCGGC TTCGCGCTGC TCGCTGGCTT CGTCGATGAC
CTCCTGGTGC GTCCCGCGGA GGGGGGCATC GGTACCGAGG TGCGGATGGT GTGGCCGGTC
GGCCACTGA
 
Protein sequence
MVRLSFSPAP VHVRTARLVG VAVARRAGVR QGLLDEVRLA IGEACTRAVA LHQQYNLSDP 
VRVEMSDSGT YAVRVVDRAP LEAGADLAAL PPYELARESL SEDALTTGVG FALLAGFVDD
LLVRPAEGGI GTEVRMVWPV GH