Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_4025 |
Symbol | |
ID | 5060507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4574715 |
End bp | 4575308 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640476286 |
Product | regulatory protein, TetR |
Protein accession | YP_001160833 |
Protein GI | 145596536 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.865842 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGACG CCTGTGCGGA GCTCGTCGAC GAGGTGGGGT ACGAGGGGCT GACCACGACG CTGCTCGCCG AGCGCGCCGA GGTGGCGATC GGGTCGGTCT ACCAGTTCTT CCCGGACAAG CGGGCGATCG TGCAGGCGTT GACCCTGCGC ACGATGGAGT CCTATCTCCA GCGGCTCGAC GAGAGGTTCG CCTCTGACGA CCTGACCCAC TGGTGGGATG GGGTTGACGC GGCAATCGAC GAGTACATCA CGATGCACCG CACCGTTCCC GGGTTCCGTA CCCTGCACTT CGGCGACGTG GTCGACCTGC ACCTGCTCGA TGAGCAGCGG GACAACAACG GGGTGATCGC GGATCAGCTG GCCCGCGTCC TCACCGAACG CTTCGGACTC ACCGACGTCC CGGAGCTTCG GTTCCATCTC GAGATCGCGG TCGAGGGCGC TGACGCGCTC ATCAAGCTGG CGTTCCGCCG GCGGCAGGAG GGCGACGACC GGGTGCTCTT GGAGGCGAAG GCGTTGGTCC GGGAGTACCT GTACCGCCAG GTTGACGCTC GGGGGGGCGT GGACCGGCCG GTGGAGGTCG CCCAGCCAGC CTGA
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Protein sequence | MLDACAELVD EVGYEGLTTT LLAERAEVAI GSVYQFFPDK RAIVQALTLR TMESYLQRLD ERFASDDLTH WWDGVDAAID EYITMHRTVP GFRTLHFGDV VDLHLLDEQR DNNGVIADQL ARVLTERFGL TDVPELRFHL EIAVEGADAL IKLAFRRRQE GDDRVLLEAK ALVREYLYRQ VDARGGVDRP VEVAQPA
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