Gene Strop_4024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4024 
Symbol 
ID5060506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4573360 
End bp4574643 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content75% 
IMG OID640476285 
Producthypothetical protein 
Protein accessionYP_001160832 
Protein GI145596535 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3616] Predicted amino acid aldolase or racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCACCC ACCCGCAGCC CGCCCGAAGG CGAGAGTGCT TGGGCATCGC CCCCGGCACC 
GCTAGCGTGC ACCACGTGGC CACCGACAGC GCGAATCTGC GCGCCCGACT CGACCGCGCG
ACCGCCCACC TCGACCCGCC GTACGCCGTG GTTGATCTCC GGGCGTTCGA CGCCAACGCC
GCCGCCCTCG CCGAGCGCGC CCGGGGTAAG CCGATCCGCC TGGCGAGCAA GTCGGTACGC
TGCCGGACGC TGATCTCCCG GGCCCTGGCC GCCCCCGGCT GGGCCGGTGT GCTGGCGTTC
ACCCTGGCCG AGGCGCTCTG GCTGGTCCGC TGCGGGGTCA CCGACGACGC GGTGGTGGCG
TACCCCTCGA CCGACCGGGC CGCGCTCGCC GAACTAGCCG GTGATCCGAC GCTCGCCGCC
GCGGTGACCC TGATGATCGA TGATCCCGCT CAGCTTGATC TGGTGGACGC CGTCCGCGCC
CCAGGCCACC GGCCCGAGCT GCGGGTCTGC CTTGACCTGG ACGCCTCCTG GCGACCGCTG
GGCGGGCGGC TGCACCTCGG GGTACGCCGC TCGCCAGTGC ATGATCCACG GGCGGCCGGC
GCCCTCGCCG CCACCGTCGC CGCCCGCTCC GGGTTCCGGC TGGTCGGACT CATGGCGTAC
GAGGCGCAGA TCGCCGGAAT GGGCGACGCG CCGCCGGGAC GGGCACTGCT CGGCGCGGCG
ATCCGACTGG TTCAACGCGG GTCGTACCGG GAGCTGCTGG CCCGCCGGAG CGCGGCGGTG
GCGGCGGTCC GCGAGCACGC CGAACTGGAG TTCGTCAACG GTGGCGGCAC CGGCAGCCTG
GCCGCCACCA GCGCCGACCC CGCGGTCACC GAGGTGGCCG CCGGGTCCGG ACTGTACGGA
CCGACGCTCT TCGACACCTA CCGGGCCTGG CGCCCGACTC CCGCCGCGTT CTTCGCCTGC
GCGGTGGCCC GCCGGCCGGC ACCCGGCTAC GCCACCGTGC TCGGCGGCGG CTGGATCGCC
TCCGGGCCGG CCGAACGCAG TCGCCTCCCC CGCCCGGTCC TCCCGGCCGA CCTCCGGTTG
GTCGGGGCGG AGGGCGCCGG CGAGGTGCAG ACTCCGCTGA CCGGCCGGGC CACCGACACA
CTTCAGATCG GCGACCGGGT CTGGTTCCGG CACGCCAAGG CCGGGGAGCT CGCCGAGCAC
GTCAACGAGC TCCACCTGGT GGAGGCGGAG ACCGTCGGGA CGGCCGCCGC CACCTACCGC
GGTGAGGGGT GGGCGTTCCT CTGA
 
Protein sequence
MSTHPQPARR RECLGIAPGT ASVHHVATDS ANLRARLDRA TAHLDPPYAV VDLRAFDANA 
AALAERARGK PIRLASKSVR CRTLISRALA APGWAGVLAF TLAEALWLVR CGVTDDAVVA
YPSTDRAALA ELAGDPTLAA AVTLMIDDPA QLDLVDAVRA PGHRPELRVC LDLDASWRPL
GGRLHLGVRR SPVHDPRAAG ALAATVAARS GFRLVGLMAY EAQIAGMGDA PPGRALLGAA
IRLVQRGSYR ELLARRSAAV AAVREHAELE FVNGGGTGSL AATSADPAVT EVAAGSGLYG
PTLFDTYRAW RPTPAAFFAC AVARRPAPGY ATVLGGGWIA SGPAERSRLP RPVLPADLRL
VGAEGAGEVQ TPLTGRATDT LQIGDRVWFR HAKAGELAEH VNELHLVEAE TVGTAAATYR
GEGWAFL