Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_4024 |
Symbol | |
ID | 5060506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 4573360 |
End bp | 4574643 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640476285 |
Product | hypothetical protein |
Protein accession | YP_001160832 |
Protein GI | 145596535 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3616] Predicted amino acid aldolase or racemase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTCCACCC ACCCGCAGCC CGCCCGAAGG CGAGAGTGCT TGGGCATCGC CCCCGGCACC GCTAGCGTGC ACCACGTGGC CACCGACAGC GCGAATCTGC GCGCCCGACT CGACCGCGCG ACCGCCCACC TCGACCCGCC GTACGCCGTG GTTGATCTCC GGGCGTTCGA CGCCAACGCC GCCGCCCTCG CCGAGCGCGC CCGGGGTAAG CCGATCCGCC TGGCGAGCAA GTCGGTACGC TGCCGGACGC TGATCTCCCG GGCCCTGGCC GCCCCCGGCT GGGCCGGTGT GCTGGCGTTC ACCCTGGCCG AGGCGCTCTG GCTGGTCCGC TGCGGGGTCA CCGACGACGC GGTGGTGGCG TACCCCTCGA CCGACCGGGC CGCGCTCGCC GAACTAGCCG GTGATCCGAC GCTCGCCGCC GCGGTGACCC TGATGATCGA TGATCCCGCT CAGCTTGATC TGGTGGACGC CGTCCGCGCC CCAGGCCACC GGCCCGAGCT GCGGGTCTGC CTTGACCTGG ACGCCTCCTG GCGACCGCTG GGCGGGCGGC TGCACCTCGG GGTACGCCGC TCGCCAGTGC ATGATCCACG GGCGGCCGGC GCCCTCGCCG CCACCGTCGC CGCCCGCTCC GGGTTCCGGC TGGTCGGACT CATGGCGTAC GAGGCGCAGA TCGCCGGAAT GGGCGACGCG CCGCCGGGAC GGGCACTGCT CGGCGCGGCG ATCCGACTGG TTCAACGCGG GTCGTACCGG GAGCTGCTGG CCCGCCGGAG CGCGGCGGTG GCGGCGGTCC GCGAGCACGC CGAACTGGAG TTCGTCAACG GTGGCGGCAC CGGCAGCCTG GCCGCCACCA GCGCCGACCC CGCGGTCACC GAGGTGGCCG CCGGGTCCGG ACTGTACGGA CCGACGCTCT TCGACACCTA CCGGGCCTGG CGCCCGACTC CCGCCGCGTT CTTCGCCTGC GCGGTGGCCC GCCGGCCGGC ACCCGGCTAC GCCACCGTGC TCGGCGGCGG CTGGATCGCC TCCGGGCCGG CCGAACGCAG TCGCCTCCCC CGCCCGGTCC TCCCGGCCGA CCTCCGGTTG GTCGGGGCGG AGGGCGCCGG CGAGGTGCAG ACTCCGCTGA CCGGCCGGGC CACCGACACA CTTCAGATCG GCGACCGGGT CTGGTTCCGG CACGCCAAGG CCGGGGAGCT CGCCGAGCAC GTCAACGAGC TCCACCTGGT GGAGGCGGAG ACCGTCGGGA CGGCCGCCGC CACCTACCGC GGTGAGGGGT GGGCGTTCCT CTGA
|
Protein sequence | MSTHPQPARR RECLGIAPGT ASVHHVATDS ANLRARLDRA TAHLDPPYAV VDLRAFDANA AALAERARGK PIRLASKSVR CRTLISRALA APGWAGVLAF TLAEALWLVR CGVTDDAVVA YPSTDRAALA ELAGDPTLAA AVTLMIDDPA QLDLVDAVRA PGHRPELRVC LDLDASWRPL GGRLHLGVRR SPVHDPRAAG ALAATVAARS GFRLVGLMAY EAQIAGMGDA PPGRALLGAA IRLVQRGSYR ELLARRSAAV AAVREHAELE FVNGGGTGSL AATSADPAVT EVAAGSGLYG PTLFDTYRAW RPTPAAFFAC AVARRPAPGY ATVLGGGWIA SGPAERSRLP RPVLPADLRL VGAEGAGEVQ TPLTGRATDT LQIGDRVWFR HAKAGELAEH VNELHLVEAE TVGTAAATYR GEGWAFL
|
| |