Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_4017 |
Symbol | |
ID | 5060499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 4565442 |
End bp | 4567259 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640476278 |
Product | hypothetical protein |
Protein accession | YP_001160825 |
Protein GI | 145596528 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGACG ACCACGCTGC TGGTTTCCCG GACCAGCACC CCACCCCGCA CGGGTCGGAC GGCAACGGCA GCCAGGGCGA GACAGGCCCG GCACCCGCGA CACCGCCTGC CGGCCCCCAA GCCAGCGAGG CCGCCGGTGG CGAGCCGGCA CGCCGCCCCC GCAGCACCGA TCCGCTGGAG CTGGGCTTCA CCCCCCGCAA ACCAGTGCCG TGGCTGGCGC CGCTCCTGCT GATCAGCACC GGTATCCGGA CCCTGCTCGC GCTACTCTTC GGCGCTTACC TGGACAAGCG GGAGCTACAG AACACCTTCG ACGCGAAGGT GACCCGGCAG GTCGGGCCGG ACGGCGGGCT CTGGCTGGAC TACGTCGCCG ACGTTGGTGA CGGTTTCGAC GCCACGTACT CGGTCGCGTA CCTGCTGGCG CAGCGGGAGC TGACAGTGGA TGGGCACCGG CTGCCCCGGG CTCAGGTCCT GGTGATGGGG GGCGACCAGG TCTACCCGTC GGCGGACTTC GAAACGTACG AGGACCGGTG CAAGGGCCCC TACCAGGCAG CGCTGCCGGT CACCCCACCC GAGCAGCCGA CGCTCTTCGC GATCCCCGGC AACCACGACT GGCACGACGG ACTCACCGCC TTCCTCCGCC TCTTCGTCCG GTCTCGGGAC CGGCACCTCG GCGGCTGGAA CACCGAGCAG TCCCGGTCGT ACTTCGCGGT GGAGTTGCCA GCAAACTGGT GGCTACTCGG CCTGGACGAC CAGTCCGGCT CATACCTGGA CGACCCACAG CTCAGCTACT TCGACTCGGT CGCGCAGCGG CTGGGGCCCC AGAGCCGGGT GATCCTGGCC GTCCCGATGC CAGCCTGGAT CAAGGCCACC AAAGACCCCT CGGCGTACGA CTCAATCGAC TACTTCATCC GCACCATCAT CGCGCCAACG GGGGCACAGG TACGCCTGCT CATCTCCGGC GACCAGCATC ACTACGCCCG ATACGCGGGG CCGGACCGGC AGCTCATCAC CTGTGGTGGC GGCGGCGCGT ACCTCTATCC GACGCACCTG TTGCCGGAGC GAATCCAGGT CCCGCCAGCG GAGACGCTGG CGCGGCGGGC GAGCGCCCCG CAGTCCTACG AGTTGGCGGG GTGCTACCCG GAGGCGACGC GGTCCCGGCG GTACGCCTGG GGCATCTTCC CGCGGCTGCC GTGGCGCAAC CGGGGCTTCG CCACGCTTCT CGGCATCCTG TACACACTAC TGATCCTGTC GATGGTCGGT GTGTGCACGA ACCACGACAG TGCCCAGCTG CGGCTGTTCA GCGTTCCGTT GGTGGCGATG GTGCTGGTGA CCCTGACCGG GGCGGTCCTC TTCGCCAAGG CACCCGGCTC CGGGGGTAAG CGACGCGTCC GGCACTGGCT CCTCGGTCTG GGACATGGTC TGGCCCACCT GGGATTGGCG GCCGCCGGCA CCTGGGCGTG GCTGACGCTG CCGTTCCACG ACTGGCCGTG GCCGCTGTCG GTGGTCGCCG CGGTCGTCTT CCTCGGCTCG GTGGGCGGGC TGGCGGCCAG CCAGCTGGTG GCGGCGTACC TCCTGGTGGC CAGCGCCTTC GGGATCCACG CCAATGAGCT CTTCGCCGGG CAGGGCATCG AGGACTCGAA GGGTTTTGTC CGCATGCGCA TCACCCCGGA CGGGACGCTG ACGATCTACC CGATCGGGGT GGATCGGGTG AGCCGTCACT GGCAGGTCAA CCCCGACGAC TCGGCCGAGT CGTCGTGGCT GGTCCCACGT ACCCCGTTGG AGCCCCGCCT GGCCGAGCCC CCGGTGGTCC TCCGCTGA
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Protein sequence | MTDDHAAGFP DQHPTPHGSD GNGSQGETGP APATPPAGPQ ASEAAGGEPA RRPRSTDPLE LGFTPRKPVP WLAPLLLIST GIRTLLALLF GAYLDKRELQ NTFDAKVTRQ VGPDGGLWLD YVADVGDGFD ATYSVAYLLA QRELTVDGHR LPRAQVLVMG GDQVYPSADF ETYEDRCKGP YQAALPVTPP EQPTLFAIPG NHDWHDGLTA FLRLFVRSRD RHLGGWNTEQ SRSYFAVELP ANWWLLGLDD QSGSYLDDPQ LSYFDSVAQR LGPQSRVILA VPMPAWIKAT KDPSAYDSID YFIRTIIAPT GAQVRLLISG DQHHYARYAG PDRQLITCGG GGAYLYPTHL LPERIQVPPA ETLARRASAP QSYELAGCYP EATRSRRYAW GIFPRLPWRN RGFATLLGIL YTLLILSMVG VCTNHDSAQL RLFSVPLVAM VLVTLTGAVL FAKAPGSGGK RRVRHWLLGL GHGLAHLGLA AAGTWAWLTL PFHDWPWPLS VVAAVVFLGS VGGLAASQLV AAYLLVASAF GIHANELFAG QGIEDSKGFV RMRITPDGTL TIYPIGVDRV SRHWQVNPDD SAESSWLVPR TPLEPRLAEP PVVLR
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