Gene Strop_4017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4017 
Symbol 
ID5060499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4565442 
End bp4567259 
Gene Length1818 bp 
Protein Length605 aa 
Translation table11 
GC content70% 
IMG OID640476278 
Producthypothetical protein 
Protein accessionYP_001160825 
Protein GI145596528 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGACG ACCACGCTGC TGGTTTCCCG GACCAGCACC CCACCCCGCA CGGGTCGGAC 
GGCAACGGCA GCCAGGGCGA GACAGGCCCG GCACCCGCGA CACCGCCTGC CGGCCCCCAA
GCCAGCGAGG CCGCCGGTGG CGAGCCGGCA CGCCGCCCCC GCAGCACCGA TCCGCTGGAG
CTGGGCTTCA CCCCCCGCAA ACCAGTGCCG TGGCTGGCGC CGCTCCTGCT GATCAGCACC
GGTATCCGGA CCCTGCTCGC GCTACTCTTC GGCGCTTACC TGGACAAGCG GGAGCTACAG
AACACCTTCG ACGCGAAGGT GACCCGGCAG GTCGGGCCGG ACGGCGGGCT CTGGCTGGAC
TACGTCGCCG ACGTTGGTGA CGGTTTCGAC GCCACGTACT CGGTCGCGTA CCTGCTGGCG
CAGCGGGAGC TGACAGTGGA TGGGCACCGG CTGCCCCGGG CTCAGGTCCT GGTGATGGGG
GGCGACCAGG TCTACCCGTC GGCGGACTTC GAAACGTACG AGGACCGGTG CAAGGGCCCC
TACCAGGCAG CGCTGCCGGT CACCCCACCC GAGCAGCCGA CGCTCTTCGC GATCCCCGGC
AACCACGACT GGCACGACGG ACTCACCGCC TTCCTCCGCC TCTTCGTCCG GTCTCGGGAC
CGGCACCTCG GCGGCTGGAA CACCGAGCAG TCCCGGTCGT ACTTCGCGGT GGAGTTGCCA
GCAAACTGGT GGCTACTCGG CCTGGACGAC CAGTCCGGCT CATACCTGGA CGACCCACAG
CTCAGCTACT TCGACTCGGT CGCGCAGCGG CTGGGGCCCC AGAGCCGGGT GATCCTGGCC
GTCCCGATGC CAGCCTGGAT CAAGGCCACC AAAGACCCCT CGGCGTACGA CTCAATCGAC
TACTTCATCC GCACCATCAT CGCGCCAACG GGGGCACAGG TACGCCTGCT CATCTCCGGC
GACCAGCATC ACTACGCCCG ATACGCGGGG CCGGACCGGC AGCTCATCAC CTGTGGTGGC
GGCGGCGCGT ACCTCTATCC GACGCACCTG TTGCCGGAGC GAATCCAGGT CCCGCCAGCG
GAGACGCTGG CGCGGCGGGC GAGCGCCCCG CAGTCCTACG AGTTGGCGGG GTGCTACCCG
GAGGCGACGC GGTCCCGGCG GTACGCCTGG GGCATCTTCC CGCGGCTGCC GTGGCGCAAC
CGGGGCTTCG CCACGCTTCT CGGCATCCTG TACACACTAC TGATCCTGTC GATGGTCGGT
GTGTGCACGA ACCACGACAG TGCCCAGCTG CGGCTGTTCA GCGTTCCGTT GGTGGCGATG
GTGCTGGTGA CCCTGACCGG GGCGGTCCTC TTCGCCAAGG CACCCGGCTC CGGGGGTAAG
CGACGCGTCC GGCACTGGCT CCTCGGTCTG GGACATGGTC TGGCCCACCT GGGATTGGCG
GCCGCCGGCA CCTGGGCGTG GCTGACGCTG CCGTTCCACG ACTGGCCGTG GCCGCTGTCG
GTGGTCGCCG CGGTCGTCTT CCTCGGCTCG GTGGGCGGGC TGGCGGCCAG CCAGCTGGTG
GCGGCGTACC TCCTGGTGGC CAGCGCCTTC GGGATCCACG CCAATGAGCT CTTCGCCGGG
CAGGGCATCG AGGACTCGAA GGGTTTTGTC CGCATGCGCA TCACCCCGGA CGGGACGCTG
ACGATCTACC CGATCGGGGT GGATCGGGTG AGCCGTCACT GGCAGGTCAA CCCCGACGAC
TCGGCCGAGT CGTCGTGGCT GGTCCCACGT ACCCCGTTGG AGCCCCGCCT GGCCGAGCCC
CCGGTGGTCC TCCGCTGA
 
Protein sequence
MTDDHAAGFP DQHPTPHGSD GNGSQGETGP APATPPAGPQ ASEAAGGEPA RRPRSTDPLE 
LGFTPRKPVP WLAPLLLIST GIRTLLALLF GAYLDKRELQ NTFDAKVTRQ VGPDGGLWLD
YVADVGDGFD ATYSVAYLLA QRELTVDGHR LPRAQVLVMG GDQVYPSADF ETYEDRCKGP
YQAALPVTPP EQPTLFAIPG NHDWHDGLTA FLRLFVRSRD RHLGGWNTEQ SRSYFAVELP
ANWWLLGLDD QSGSYLDDPQ LSYFDSVAQR LGPQSRVILA VPMPAWIKAT KDPSAYDSID
YFIRTIIAPT GAQVRLLISG DQHHYARYAG PDRQLITCGG GGAYLYPTHL LPERIQVPPA
ETLARRASAP QSYELAGCYP EATRSRRYAW GIFPRLPWRN RGFATLLGIL YTLLILSMVG
VCTNHDSAQL RLFSVPLVAM VLVTLTGAVL FAKAPGSGGK RRVRHWLLGL GHGLAHLGLA
AAGTWAWLTL PFHDWPWPLS VVAAVVFLGS VGGLAASQLV AAYLLVASAF GIHANELFAG
QGIEDSKGFV RMRITPDGTL TIYPIGVDRV SRHWQVNPDD SAESSWLVPR TPLEPRLAEP
PVVLR