| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4016 |
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| Symbol | |
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| ID | 5060497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 4563630 |
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| End bp | 4565093 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640476276 |
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| Product | phage integrase family protein |
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| Protein accession | YP_001160824 |
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| Protein GI | 145596527 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGTA AGACTGGGCG CCCGGGGTTC TCGTACCGCG GCATCTCCGT TACCTGGAGC
GACCAGCGGA AGCGCTACGA GGGAAAGGTG ACCGTCGGCA AGCGCGCCGA CGGCCGCTAT
GACCGTAAAA GCGTATACGG AAAGACCTCT GACGCCATCA AGGCAGACAT CCGAAAACTA
CAGGAGAAGG CCGACAGGAA GATCCCGATT GCAGCGGGCC GGACGCCGAC TGTTCGGAAG
TGGTTCACTG AGTGGCTTAC CGAGCTGCAT GCGACACTGG AGCGCCCTCT CGCGCCTCGC
ACGGTCGACG CGTACCTATC GGCCTGCATG ACATGGATCT TCCCGGCTAT CGGCGATGTA
GCTATCGACG AACTAACTGC GGCGAACCTT GACGCCTTGT ATTCCAAGAT GCGGCCCCAC
GTCGCCCCAA CCTACCTGCT CAAGGTGCAC GCGATCATTC GGCGTGGCCT GAAAATCGCA
ATGGCGCGCG ACCTGGTACA CCGAAACGTC GCAGCAATTC GCGGAAACCC AGGCAGCACG
AAAGGGCGCA GGAAGAAGCC ACTAACAGTC GAGCAGGCCC GCTGCCTCAT TACTGCGATC
GAACGGCGGC CGACCGCGTT GCGGTGGAAA GTCGGCCTCT CAATCGGCCC CCGACAAGGC
GAGGCGTTGG GGCTTACGTG GCCGTGCGTT GACCTGGACG CGGGCGCGAT CGCGAAGGAT
TGGCAGTTGC AGCGCCTGAA ATGGCGGCAC GGCTGCCCAG ACCCAGTGAA ATGCGCAGCC
CAGTTCTGCC GGCGCGAAAA TTGCCAGCCG AGTTGGGCGC ACGGGTGCAC CGACCCGGGC
CGCTGCTATC AGCAGCCGTT CCGGTGTCCA GCACGGACAC CGGGCGACCG ATGCCCCCGG
CATCACCGCC CATGCCCGAA GCCTTGCCCG CCCGGATGCA CCCGGCACGC CACCCGGTGT
CCCCAACGCA GGGACGGAGG ACTGAGGCTG ACCCGGCCGA AGACGTGGCT GGCCTCCGAC
GACGACGAGG TGGCCACTGA TCTAGTGCTG CTGCCGGCGA CTCTCGCAGC GGAACTGCGC
GAGCACAAGC GGCAACAGAG CGGGCTCAAA CAGAGGCTGG GCAAGGAGTA CAAAGACGAG
GGGTTAGTGT TTTGCCAGCC CAACGGTCGG CCCGTCGACC CTCGCGCCGA TCTCGACGAC
TGGTACCAGA TCCTCGCTGA GGCTGGATTG CCGCGCGCGG GGTCGCACGT GGCGCGGCAC
ACAGCAGCAA CGATGCTGCT GGACGCTGGG CTCGATATCT CCGCAGTCCA GCAGGCCATG
GGCTGGCGGG ACATCCGTAC GGCCCGTCGG TATGCGGCGC CGAGTCTCGG CCAGGCGAAA
CGCGCAGCCG AGGCGGCAGA GACGGCACTC TTCCGCCCCG TGTCCGATCT TGCTGAGCAT
CGGGCTCGGA AGAGCGCCGG GTAG
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| Protein sequence | MPSKTGRPGF SYRGISVTWS DQRKRYEGKV TVGKRADGRY DRKSVYGKTS DAIKADIRKL
QEKADRKIPI AAGRTPTVRK WFTEWLTELH ATLERPLAPR TVDAYLSACM TWIFPAIGDV
AIDELTAANL DALYSKMRPH VAPTYLLKVH AIIRRGLKIA MARDLVHRNV AAIRGNPGST
KGRRKKPLTV EQARCLITAI ERRPTALRWK VGLSIGPRQG EALGLTWPCV DLDAGAIAKD
WQLQRLKWRH GCPDPVKCAA QFCRRENCQP SWAHGCTDPG RCYQQPFRCP ARTPGDRCPR
HHRPCPKPCP PGCTRHATRC PQRRDGGLRL TRPKTWLASD DDEVATDLVL LPATLAAELR
EHKRQQSGLK QRLGKEYKDE GLVFCQPNGR PVDPRADLDD WYQILAEAGL PRAGSHVARH
TAATMLLDAG LDISAVQQAM GWRDIRTARR YAAPSLGQAK RAAEAAETAL FRPVSDLAEH
RARKSAG
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