Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_4013 |
Symbol | |
ID | 5060494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4561842 |
End bp | 4562696 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640476273 |
Product | BRO domain-containing protein |
Protein accession | YP_001160821 |
Protein GI | 145596524 |
COG category | [K] Transcription |
COG ID | [COG3617] Prophage antirepressor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCCACC CACCTGGCCA GCCTGGAGGC GGCAGCGGAA GCAGCGGCGG CACCACCGGC CCCGGCCGCG AGATCACAAC CTTCGAATTC GGCGATCTCC CGCTGAGGAC AGTCACGGTC GGCGGTGAGC CCTGGTTCGT GGTCGCTGAC GCCTGTCAGG GGTTGGATCT CACCAACCCG AGCATGGCCG CGAGCAGGCT TCACGCCGAT GACCTAAGTA CTGCTGAGGT CATCGACGGC ATGGGACGTA GGCAGCACGT CCGGATCACC AACGAGTCCG GCCTATACGA CTTGATCTTT CAGAGTCGTA AGCCTGAGGC ACGTGCGTTC CGCCGCTGGG TGACTCACGA GGTGTTGCCC GCGATTCGGG CGACGGGCCG GTACGAGTCG GTGCCGGCGG TGCCGCAGTC GTACGCGGAT GCGTTGCAGC TTGCCGCGGA TCAGGCCCGG CAGCTTGACG CGCAGGCTGC CGAGTTGGCG GAGGCCGCGC CGAAGGCCCA GTCGTGGGAC ACCCTCGCGT CGGCTGACGG CGACTGGTCA GTCCGGGACG CCGCGAAGAT CCTGTCGCGC GATCCCAACC TGAACGTGGG GGAGCGGCGG CTGTTCACGG TCCTCGGCGA GCAGCAGTGG ATCTATCGGC AGCGCGGGGA CGGCCGTTGG CGGCCGTATC AGCGGGCTGT CGAGTCGGGC TGGCTGTCCG AACTACCCGC CTCGCACTAC CACCCGCGTA CGGGGGAGCT GGTGCTTGAT GTGCCTCAGG TGCGGGTCAC CACCCGTGGT CTGCATCTGT TGCATCGCCG GCTGGGTGGT GTGCAGCCGT TGCGGACGCA TGAGCAGACG GCGCTGATCG CATGA
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Protein sequence | MTHPPGQPGG GSGSSGGTTG PGREITTFEF GDLPLRTVTV GGEPWFVVAD ACQGLDLTNP SMAASRLHAD DLSTAEVIDG MGRRQHVRIT NESGLYDLIF QSRKPEARAF RRWVTHEVLP AIRATGRYES VPAVPQSYAD ALQLAADQAR QLDAQAAELA EAAPKAQSWD TLASADGDWS VRDAAKILSR DPNLNVGERR LFTVLGEQQW IYRQRGDGRW RPYQRAVESG WLSELPASHY HPRTGELVLD VPQVRVTTRG LHLLHRRLGG VQPLRTHEQT ALIA
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