Gene Strop_3988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3988 
Symbol 
ID5060469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4541235 
End bp4541828 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content68% 
IMG OID640476248 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001160796 
Protein GI145596499 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGG TGGGGCGCCG TTCGCTACTG TCCTGCCCTG TGGCAAGCAC GAACCTCCGC 
ACCGAACGCC TCGAACTTCG GCCGGTACGT GACGAGGACA TCGACCGCAT CCTGGAGTAC
CGCAACCTGC CGGAGGTCAC CCGCTGGCTG CTCCGCACCG ACGTTGACCC AGCGGCTTTC
CGAGCGGCAT GGCGACGCTC AGCGGAAGAC CCCCACGACC ACAGGGTGGC GGTGACCCGC
GACGGCGTCG TCATCGGCAC CGTCTCGCTC GACGTGCGCA CCAGTATGGG GCAGCCCGGC
ACGCCGCCGG GGACAGAAGC CGAGGTCGGC TACATCTTCG ACCCGAGGTA CGGCGGCCAC
GGCTACGCGA CTGAAGCGGT CACCGCGATG GTCTCCTACT CGTTCGCCCG GTTGGGCGTA
CGCCGGATCA CCGCTGGTTG CTATGCGGAC AACCTCGCCT CGGTGCGGCT CCTCGAAAAA
GTCGGCATGC GGCGGGAGCA GCACGGCGTC GGCAACTCCT GGCACGCCGA GTTGGGCTGG
GTGGACGGCT ACACGTACGC CCTGCTCGCC GAGGAGTGGT CCAAACAGCC GTAA
 
Protein sequence
MAEVGRRSLL SCPVASTNLR TERLELRPVR DEDIDRILEY RNLPEVTRWL LRTDVDPAAF 
RAAWRRSAED PHDHRVAVTR DGVVIGTVSL DVRTSMGQPG TPPGTEAEVG YIFDPRYGGH
GYATEAVTAM VSYSFARLGV RRITAGCYAD NLASVRLLEK VGMRREQHGV GNSWHAELGW
VDGYTYALLA EEWSKQP