| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3984 |
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| Symbol | |
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| ID | 5060465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 4536350 |
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| End bp | 4537522 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640476244 |
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| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
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| Protein accession | YP_001160792 |
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| Protein GI | 145596495 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACC GGAATCGCCC ACACCGCCGC CCGACGGTGT TCTCGACCCG GCGACGCGTG
CTGGCAGCCG TGTCGTCGAT CGCCCTCGTC GGCGGTCTTG CCCTCAGTGG GGCCGCCCCC
GCGGCGAGCG CTGACACCGT CCACCCCCGC GACGGCGTAC AGGCCGACCT CGACCGCCTC
GTGAGCGAGG GCACGTTCCC AGCCGCCCTC GCCGCCGTCC GCACCTCCGA CAGCCGTACC
CGTAACTACA CCGCCGGCGT GGCCGAACTC GACACCAGAC GGAAGCCGCC GGTCGATGGG
CGGGTGCGCA TCGGCAGCAA CACCAAGACC TTCGTCGCCA CCGTGGTCCT GCAACTCGTC
GGCGAGGGCA AGGTCGACCT GGACGAACCG ATCGAGACGT ACCTGCCCGG CCTGATCCGT
GGCGACGGCA TCGACGGGCG ACAGATCACC GTACGGCAGG TGCTGCAGCA GACCAGTGGC
CTACCCGGCT ATGTGGACGA CATCGCCCCA GACTTCTTCC TCCTCCGGCA CACCTACTTC
GAGCCGCGCG ACCTACTCGA CCTGGCCCTC GCGGACAAGG CGAGCTTCGC ACCCGGCACG
AGGTGGGAGT ACAGCAACAC CAACTACCTC GTCGCCGGGC TGCTCATCCA GAAGGTCACC
GGCCGTCCGG TGGCCGAGGA AGTCACCAAC CGCATCATCG TTCCCCTCCG GTTGCGTGAC
ACGTACTTCC CCCGCGTCGG CGAACAGGGC ATCCGGGGCC GGCACCCGCA CGGCTACTTC
ACCGACGACC CGGACAAGCC GCTGCAGGAC GTCACGAAGA TGGACCCGTC CTGGGGCTGG
GCGGCCGGCG CGATGATCTC CAGCCCCAGC GACACCAATC GCTTCTTCGC CGCCCTCCTC
GCCGGGGACC TGCTCCGGCC CGCCGAACTC GACCAGATGC GCACCACGGT CCCCGCCTTT
CCCGGCCGCG GCTACGGCCT CGGCCTGATG AGCTGGGACC TGACCTGCGG CGACCGCGCC
TGGGGCCACG GCGGGGACAT CCCCGGCTTC ACGACCCGCG GCGGCGTCAC CGAGGACGGC
CGTGCCGTCA CCCTCGCCGT CACCTCGACG CCGACGACCG AGACCAGCGC CAACCAGGTG
GACGCAGCCG TCGACGCGGC TCTCTGCAGG TAG
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| Protein sequence | MSDRNRPHRR PTVFSTRRRV LAAVSSIALV GGLALSGAAP AASADTVHPR DGVQADLDRL
VSEGTFPAAL AAVRTSDSRT RNYTAGVAEL DTRRKPPVDG RVRIGSNTKT FVATVVLQLV
GEGKVDLDEP IETYLPGLIR GDGIDGRQIT VRQVLQQTSG LPGYVDDIAP DFFLLRHTYF
EPRDLLDLAL ADKASFAPGT RWEYSNTNYL VAGLLIQKVT GRPVAEEVTN RIIVPLRLRD
TYFPRVGEQG IRGRHPHGYF TDDPDKPLQD VTKMDPSWGW AAGAMISSPS DTNRFFAALL
AGDLLRPAEL DQMRTTVPAF PGRGYGLGLM SWDLTCGDRA WGHGGDIPGF TTRGGVTEDG
RAVTLAVTST PTTETSANQV DAAVDAALCR
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