| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3982 |
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| Symbol | |
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| ID | 5060463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 4534160 |
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| End bp | 4535650 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640476242 |
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| Product | polymorphic outer membrane protein |
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| Protein accession | YP_001160790 |
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| Protein GI | 145596493 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01376] Chlamydial polymorphic outer membrane protein repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.401558 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGCGGG TGGTGGGTCC TTGTCGCTCA CGGGGGAAGG ACATCGATTT CACGATGAGT
AATCAGGACC AGACTCAGGG GCCGGTGCGG CCGGTTGGAC GTCGGGCGAA GTCGCGGTGG
CGGTGGTGGG CGGTGGGGTT GGCCGGGGTG ACCGGTCTGG CCCTGGGTGC TGTCGGCGTT
GCTGCCAGTC CGGCCGCGGA TGCGCTCGGG CGCACCCTGA CCGCTGCCGA TGATCACGGT
GGCGACCGCG GCGGTGACCG CGGCAAGCGG GACGCGGGTA AGCACGACGG GGGTAAGCGC
AAGCACGACG ACAAGGGCAA GGACGGGAAG AAGGGCAAGG ACGGGGAGAA GAGCAAGGGT
TCGGAGAAAA AGCCGACGGG GATTCCGGTC CCGTGTGACG CGGACGCGTT GATCGCGCAG
ATCACCCTGG CCAACGCCCG CGGCGGTGCC GTGCTTGATT TGGCCAAGGA CTGCACCTAC
CTGCTCACCG CCGACATCGA CGGTGCGGGG CTGCCCGCGA TCACCGCCCC GATCACCCTC
AACGGCGGCA AGAAGACCAC CATCGAACGC GCCGCCGCTG TTGACGAATT CCGGATCTTC
ACTGTTGACG TTGGTGGTGA CCTCACCCTC AACAAGCTGA CCGTCACCGG CGGGCAGACC
GACGGCGACG GCGGGGGGAT CCTGGTCAAC GCCGGTGGAG CGCTGACCAC CACGCACAGC
ACCATCACCC GCAACATCTC CGGCGGCTCA GGCGGCGGCA TCGCCAACAA CGGCACCACC
CGAGTCAAGT ACTCCACAGT CGACCGCAAC ACCGCCGCCA CGGAGGGCGG CGGAATCTAC
AGCACCGGCC TGCTGGAAGT CGTCAAGTCC CACATCGACA ACAACACGGT CACCAATGGC
GGTGGGGGCG GCATCTCCTC AGCCACCAGC ACCGTCACCG TCAAGGGCGG CACCATCTCC
GGCAACTTCG CGAACATCAG CGCATTGCGG GTAGTCGGCG GCATCGGCAC GGTTACCGGC
ACCACGTTCA CCAACAACAC GGCCCGCAGC AGTGGCGGTG GCGCCGCCCG GGTCGAGAGC
GACGGACAAC TCACGATGCG GAAGGTCAAC CTGACCGACA ACACCGCATC GGCCCTCGGC
GGTGCCTTGT TCGTGGAATC GGAAAGTTTC GCTGTCGTCG AGGACAGCAT CATCAAGAAC
AACACCAATA CCCTTGTAGC CGGCGGCGGA GGAATCTACA ACGCAGGCCA AACAGTCATA
CGACACACCA AGATCATCGG CAACCAAGCC CCCGACATCG GCGGCGGCAT CTACAACGAA
GGCACGATCA GCCTCTTCGC CACGAAGGTG GTCGAGAACA TCGCCCTCAC CGACGGCGGG
GGCATCTTCA ACGCTGTCGC TGGCACGGTG AACCTGAACA CCGCCACCGG CACCATCGTC
ATCAAGAACC GACCCAACAA CTGCGTCAAC GTCCCCGGCT GCGCCGGATA G
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| Protein sequence | MVRVVGPCRS RGKDIDFTMS NQDQTQGPVR PVGRRAKSRW RWWAVGLAGV TGLALGAVGV
AASPAADALG RTLTAADDHG GDRGGDRGKR DAGKHDGGKR KHDDKGKDGK KGKDGEKSKG
SEKKPTGIPV PCDADALIAQ ITLANARGGA VLDLAKDCTY LLTADIDGAG LPAITAPITL
NGGKKTTIER AAAVDEFRIF TVDVGGDLTL NKLTVTGGQT DGDGGGILVN AGGALTTTHS
TITRNISGGS GGGIANNGTT RVKYSTVDRN TAATEGGGIY STGLLEVVKS HIDNNTVTNG
GGGGISSATS TVTVKGGTIS GNFANISALR VVGGIGTVTG TTFTNNTARS SGGGAARVES
DGQLTMRKVN LTDNTASALG GALFVESESF AVVEDSIIKN NTNTLVAGGG GIYNAGQTVI
RHTKIIGNQA PDIGGGIYNE GTISLFATKV VENIALTDGG GIFNAVAGTV NLNTATGTIV
IKNRPNNCVN VPGCAG
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