| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3964 |
|---|
| Symbol | |
|---|
| ID | 5060445 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 4516787 |
|---|
| End bp | 4517311 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640476224 |
|---|
| Product | regulatory protein, TetR |
|---|
| Protein accession | YP_001160772 |
|---|
| Protein GI | 145596475 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGTCG ACGCACGGCG CAACCGGGAC CGGTTGGTGG CGGTGGCCAC CGCCGTCATC
GCCGAGCATG GCCCCGCCGC CTCCCTAAAC GAGATCGCGC AACGGGCAGG CGTCGGTGCC
GGCACCCTGT ACCGACACTT CCCCACCCGG GAGTCGCTTC TGCTGGAAGT CTTCACCACC
CGGATCGAGA CCCTGTGCGA ACGCGCCCGT GAGTTGGCCC AGAGCCGGTC GCCGGGCGAT
GCGTTGACGG CGTGGCTGGA GGCGTTCCTT CAGCACTGCC TGACGGATCG AGGTCTGGCC
GAAACGATCA TGAAGGCGCC GCCGGGCGCC GACCTGGACT GCGCCGCGAA GCTACATACG
GCGGGGGCGG ACCTGGTCGC TCGGGCTCAG CAGGCCGGCG TTGTGCGCAC CGGCCTCGAG
GTCGAGGACA TCCTGCAACT GACGATCGGT ATCGCTCTGG CGGCGGATGG TCCCGGCCGC
GCGAAACGTC TCCTTTCCTT CGCCTTCGAT GGCCTGCGCG CCTGA
|
|---|
| Protein sequence | MRVDARRNRD RLVAVATAVI AEHGPAASLN EIAQRAGVGA GTLYRHFPTR ESLLLEVFTT
RIETLCERAR ELAQSRSPGD ALTAWLEAFL QHCLTDRGLA ETIMKAPPGA DLDCAAKLHT
AGADLVARAQ QAGVVRTGLE VEDILQLTIG IALAADGPGR AKRLLSFAFD GLRA
|
|---|
| |