Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3938 |
Symbol | |
ID | 5060416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4492011 |
End bp | 4492739 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640476195 |
Product | transcription termination/antitermination factor NusG |
Protein accession | YP_001160746 |
Protein GI | 145596449 |
COG category | [K] Transcription |
COG ID | [COG0250] Transcription antiterminator |
TIGRFAM ID | [TIGR00922] transcription termination/antitermination factor NusG |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCTGAGT ACGACGAGAC CGCCGAGCCC GTGGACGAGC AGTCCACGGT TGCGACCGCG GCTGGTGACA TGTCGGTTGA GGCCGCCAGC GAGCCGGAGC TCTCCGACAG CGCCAGCGAG CCGGCCGAGG AGCCCGAGTT CGACCCGGTT GCCGAGCTGC GCCAGAAGCT GCGCTACGCC CCGGGCGACT GGTATGTGGT GCACTCGTAC GCCGGCTACG AGAACAAGGT CAAGACCAAC CTCGAGACCC GGATCACCTC CCTCGACATG GAGGACTACA TCTACCAGGT CGAGGTGCCG ACCCGGGACG AGGTCGAGGT CAAGAACGGC AAGCGTTCCC AGGTTCAGGC CAAGGTCTTC CCCGGCTACA TCCTGGTTCG AATGGAGCTC ACCGCCGAGT CGTACTCCTG CGTGCGGAAC ACGCCAGGCG TGACCGGCTT CGTGGGCGCC ACCGACCGGG CCGACCGTCC TGCGCCGCTC AGCCTTGACG AGGTGTTGAA GTGGCTGGCG CCAGCAGTCG AGGCGGTGGA GAAGAAGGCG AAGCCCGAGG TCAAGGTCCT CGACTTTGAG GTTGGCGACT CGGTTACCGT CACCGACGGC GCCTTCGCCT CGCTGCCGGC GACGATCAGC GAGATCAATG CTGACCAGCA GAAGCTCAAG GTGCTGGTGT CGATCTTCGG TCGAGAGACA CCGGTGGAGC TGAACTTCAA CCAGGTCGCC AAGATCTGA
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Protein sequence | MPEYDETAEP VDEQSTVATA AGDMSVEAAS EPELSDSASE PAEEPEFDPV AELRQKLRYA PGDWYVVHSY AGYENKVKTN LETRITSLDM EDYIYQVEVP TRDEVEVKNG KRSQVQAKVF PGYILVRMEL TAESYSCVRN TPGVTGFVGA TDRADRPAPL SLDEVLKWLA PAVEAVEKKA KPEVKVLDFE VGDSVTVTDG AFASLPATIS EINADQQKLK VLVSIFGRET PVELNFNQVA KI
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