Gene Strop_3934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3934 
Symbol 
ID5060412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4489207 
End bp4489593 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content66% 
IMG OID640476191 
Productribosomal protein L7/L12 
Protein accessionYP_001160742 
Protein GI145596445 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0222] Ribosomal protein L7/L12 
TIGRFAM ID[TIGR00855] ribosomal protein L7/L12 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.189008 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGC TCAGCACCGA CGAGCTGCTC GACGCGTTCA AGGAGATGAC GCTGATCGAG 
CTCTCTGAGT TCGTGAAGCA GTTCGAGGAG ACCTTCGAGG TCACCGCCGC GGCTCCGGTC
GCCGTGGCCG CTGGCGCCCC GGTCGCCGGT GGCGCTGCCC CGGTCGAGGA GGAGAAGGAC
GAGTTCGACG TCGTCCTCGA GGCCGACGGT GGCAAGAAGA TCCAGGTCAT CAAGGTCGTG
CGTGAGCTGA CCGGCCTGGG CCTCAAGGAG GCCAAGGACC TGGTTGAGGC CGCGCCGAAG
CCGGTCCTGG AGAAGGCCAA CAAGGAGACC GCCGAGAAGG CCAAGGCCAA GCTCGAGGGT
GAGGGTGCCA AGGTCACCCT CAAGTGA
 
Protein sequence
MAKLSTDELL DAFKEMTLIE LSEFVKQFEE TFEVTAAAPV AVAAGAPVAG GAAPVEEEKD 
EFDVVLEADG GKKIQVIKVV RELTGLGLKE AKDLVEAAPK PVLEKANKET AEKAKAKLEG
EGAKVTLK