Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3923 |
Symbol | rplC |
ID | 5060401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4473405 |
End bp | 4474064 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640476180 |
Product | 50S ribosomal protein L3 |
Protein accession | YP_001160731 |
Protein GI | 145596434 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0087] Ribosomal protein L3 |
TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACAGGC AAGTCAAGGG GATCCTGGGC GCGAAGCTCG GCATGACCCA GGTCTGGGAC AACAACCGTG TTGTCCCGGT GACTGTGGTG CAGGCCGGCC CGTGTGTCGT CAGCCAGGTC CGTAGCCAGG AGAAGGACGG CTACGCGGCG GTCCAGTTGG CGTATGGCGC CATCGACCCA CGCAAGGTCA AGAAGCCGAT CAGCGGTCAC TACGCAAAGG CCGATGTCGC GCCGCGCCGG CACATCGTCG AGCTGCGCAC GACCGACGCC GGCGAGTACT CGTCCGGCCA GGAGGTCACG GTCGAGGAGT TCCCGGCCGG TATCTCGGTC GACGTGACCG GAAAGACCAA GGGCAAGGGC TACGCCGGCC CGATGAAGCG GCACGGCTTC CACGGCCTGC GCGCCAGCCA CGGTGTGGAG CGCAAGCACC GCTCGCCGGG CTCGATCGGC GGCTGCGCCA CTCCGGGACG TGTCTTCAAG GGCACCCGGA TGGCCGGCCG GATGGGTGGT GTGCGCTACA CCGTCCAGAA CCTGACCGTC CAGGCGGTTG ACACCGAGAA CAATCTCCTG CTCGTCCGTG GTGCCATCCC TGGCCCCAAG GGCGCGCTGG TCCTGGTTCG CACTGCGGCC AAGGCGAAGA AGGGTGGGGC AGCCAAGTGA
|
Protein sequence | MDRQVKGILG AKLGMTQVWD NNRVVPVTVV QAGPCVVSQV RSQEKDGYAA VQLAYGAIDP RKVKKPISGH YAKADVAPRR HIVELRTTDA GEYSSGQEVT VEEFPAGISV DVTGKTKGKG YAGPMKRHGF HGLRASHGVE RKHRSPGSIG GCATPGRVFK GTRMAGRMGG VRYTVQNLTV QAVDTENNLL LVRGAIPGPK GALVLVRTAA KAKKGGAAK
|
| |