| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3908 |
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| Symbol | rplF |
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| ID | 5060386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4466408 |
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| End bp | 4466950 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640476165 |
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| Product | 50S ribosomal protein L6 |
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| Protein accession | YP_001160716 |
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| Protein GI | 145596419 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0097] Ribosomal protein L6P/L9E |
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| TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.383455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGCGTA TTGGACGTAA GTCGATCCCG GTGCCAACCG GCGTTGACGT CACGATTGCC
GGCCAGACCG TCACGGTCAA GGGCCCCAAG GGCGAACTCT CACACACCAT CGCCGAGCCG
ATCACCATCG ACCGTGCGGA GGACGGGCAG CTGAACGTGG CTCGCCCGAA TGACGAGCGC
AAGGCCAAGG AGCTGCACGG ACTGAGCCGT ACTCTGGTCG CCAACATGAT CGTCGGCGTT
ACCGAGGGCT ACCGGAAGAG TCTGGAGATC GCGGGCACCG GTTACCGGGT TACCGCGAAG
GGCAAGGACC TCGAGTTCGC CCTCGGGTTC TCGCACCCGG TCACCGTGGT GGCGCCGGAG
GGCATCACCT TCTCGGTGGA GAAGCCGACG CTGTTCCACG TGGCCGGCAT CAACAAGCAG
CTGGTCGGTG AGGTCGCCGC GAACATCCGC AAGATCCGTC CGCCGGAGCC CTACAAGGGC
AAGGGCGTGA AGTACCAGGG TGAAGTGATC CGCCGTAAGG CCGGAAAGGC AGGTAAGAAG
TGA
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| Protein sequence | MSRIGRKSIP VPTGVDVTIA GQTVTVKGPK GELSHTIAEP ITIDRAEDGQ LNVARPNDER
KAKELHGLSR TLVANMIVGV TEGYRKSLEI AGTGYRVTAK GKDLEFALGF SHPVTVVAPE
GITFSVEKPT LFHVAGINKQ LVGEVAANIR KIRPPEPYKG KGVKYQGEVI RRKAGKAGKK
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