| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3904 |
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| Symbol | rplO |
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| ID | 5060382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4464748 |
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| End bp | 4465191 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640476161 |
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| Product | 50S ribosomal protein L15 |
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| Protein accession | YP_001160712 |
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| Protein GI | 145596415 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0200] Ribosomal protein L15 |
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| TIGRFAM ID | [TIGR01071] ribosomal protein L15, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.196283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGATCA AGGTCCACCA CCTGCGTCCG GCGCCGGGTG CCAAGACCAC CAAGACCCGT
GTGGGTCGTG GTGAGGGCTC CAAGGGCAAG ACCGCCGGTC GCGGTACCAA GGGGTCCAAG
GCCCGGAAGA ACATCTCGGC GGCCTTCGAG GGTGGGCAGA TGCCTATCCA CATGCGGCTG
CCGAAGATGA AGGGCTTCAA GAACAAGTTC AAGGTGACCT TCCAGGTCGT CAACCTGGAG
CGGCTCGCCG AGCTGTTCCC GAACGGCGGC CAGGTTGGCC CGGCCGAGTT GGTCGATGCC
GGTGCGGTCC GCAAGGGCCA GCCGGTCAAG GTTCTCGGAA CCGGCGACCT CGGTGGCGTG
ACCCTCCAGG TCTCGGCGCA CGCGTTCAGC GCGTCGGCCA AGGAGAAGAT CACCGCTGCC
GGTGGTTCGA TCACCGAGCT GTAA
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| Protein sequence | MTIKVHHLRP APGAKTTKTR VGRGEGSKGK TAGRGTKGSK ARKNISAAFE GGQMPIHMRL
PKMKGFKNKF KVTFQVVNLE RLAELFPNGG QVGPAELVDA GAVRKGQPVK VLGTGDLGGV
TLQVSAHAFS ASAKEKITAA GGSITEL
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