Gene Strop_3897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3897 
Symbol 
ID5060375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4458937 
End bp4459344 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content69% 
IMG OID640476154 
Product30S ribosomal protein S11 
Protein accessionYP_001160705 
Protein GI145596408 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0100] Ribosomal protein S11 
TIGRFAM ID[TIGR03632] 30S ribosomal protein S11 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACCGA AGGCTCGTGC CGGAGCCGCC GTCAAGAAGG TCCGGCGCAA GGAACGCAAG 
AATGTCGCCC ACGGCCAGGC GCACATCAAG AGCACTTTCA ACAACACCAT CGTGTCCGTC
ACGGACCCGA CCGGTGCGGT CATCTCCTGG GCCTCGGCCG GCCAGGTTGG CTTCAAGGGC
TCCCGCAAGT CGACTCCGTT CGCCGCGCAG CTGGCCGCCG AGGCCGCCGC GCGTCGCGCG
ATGGAGCACG GCATGCGCAA GGTCGACGTG TTCGTCAAGG GCCCCGGCTC CGGCCGGGAG
ACCGCCATCC GTTCGCTGCA GGCCGTCGGC CTGGAGGTCG GTCAGATCTC TGACGTGACT
CCGCAGCCGC ACAACGGGTG CCGTCCGCCG AAGCGTCGCC GGGTCTGA
 
Protein sequence
MPPKARAGAA VKKVRRKERK NVAHGQAHIK STFNNTIVSV TDPTGAVISW ASAGQVGFKG 
SRKSTPFAAQ LAAEAAARRA MEHGMRKVDV FVKGPGSGRE TAIRSLQAVG LEVGQISDVT
PQPHNGCRPP KRRRV