| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3893 |
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| Symbol | |
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| ID | 5060371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4455676 |
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| End bp | 4456506 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640476150 |
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| Product | tRNA-pseudouridine synthase I |
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| Protein accession | YP_001160701 |
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| Protein GI | 145596404 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGGAGC GCACCCGGGT ACGGCTGGAT GTCTCGTACG ACGGCGCCGA CTTTTCCGGC
TGGGCGGTCC AGCCGGAGCG GCGTACGGTC GCTGGTGCCC TCGTGCAGGC GCTTGACCTG
GTGCTCGGCG TCGGCGCGGC GACCGGACTG ACCGTCGCCG GCCGGACCGA CGCCGGTGTG
CACGCCACCG GGCAGGTCTG CCACGTCGAC CTCCTGACCG AGGTGTGGCA TCGGCACGAG
CACACCCTGC TGCGGCGGCT GGCCCGGCTG CTCCCCGCCG ACGTGCGGAT ACGGGCGATG
ACGGAAGCGC CGGACGACTT CGACGCCCGT TTCTCGGCGA CCTTCCGGCG GTACGAGTAC
CGGGTCACCG ACGCGCCCTG GGGTGCCGAA CCGTTGCGTC GTCACGACAC CCTGGCCTGG
CCGAGCCGGC TCGACCTGGC CGCGCTGAAC GTGGCCGCCG ACGGGCTGGT GGGGGAGCAT
GACTTCGCCG CGTACTGCCG GCGTAAGGAG AACGCGACGA CGCTGCGGGA GGTGACCCGG
CTGGAGTGGC GGCGTGCCCC GGACGGGACT CTCGTGGCGA CCGTGCAGGC CGACGCCTTC
TGCCAGGCGA TGGTCCGCAG TCTGGTCGGT GCGATGCTGG CCGTCGGGGA CGGCCGCCGC
CCAGCCGACT GGCCGGCCGG TCTGCTCACC CGTCGGGAGC GCGCCAGCGA GGTGAACGTC
GCTCCGGCGC ACGGCTTGAC CCTGGTCGCG GTGGGCTACC CGGATGACCC GTCCGAGTAT
GCCCGCCGGG CTACCCTGAC CCGCCGGTTG CGGGTGCCGC CGCAGGCCTG A
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| Protein sequence | MQERTRVRLD VSYDGADFSG WAVQPERRTV AGALVQALDL VLGVGAATGL TVAGRTDAGV
HATGQVCHVD LLTEVWHRHE HTLLRRLARL LPADVRIRAM TEAPDDFDAR FSATFRRYEY
RVTDAPWGAE PLRRHDTLAW PSRLDLAALN VAADGLVGEH DFAAYCRRKE NATTLREVTR
LEWRRAPDGT LVATVQADAF CQAMVRSLVG AMLAVGDGRR PADWPAGLLT RRERASEVNV
APAHGLTLVA VGYPDDPSEY ARRATLTRRL RVPPQA
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