| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3889 |
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| Symbol | |
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| ID | 5060367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4451427 |
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| End bp | 4452053 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640476146 |
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| Product | thiamine-phosphate pyrophosphorylase |
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| Protein accession | YP_001160697 |
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| Protein GI | 145596400 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0352] Thiamine monophosphate synthase |
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| TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGTCCC TTGGACGCTT ACATCTGATT ACCGACGCCC GCGCTGGGCG AAACCCACTC
ACCGTGGTGC AGGCGGCCCT GTCGGTGGCC CGCACCGAAC TGGTCGTCCA GGTCCGGGTG
GCCGACGATG CGACCGACCG GCAGGCGTAC GACCTGGCCC GCCGGGTGAT CGCGCTCTGC
GCCCGGTACG ACGCGACCTG CCTGGTGAAC GATCGGCTGC ACGTGGCCCT GGCGGTTGGT
GCTGCCGGTG GACACGTGGG CGCCGACGAC CTGCCGGTCG GCGCGGCCCG CGCGGTGCTC
GGCTCCGCCG CCGTCCTCGG CGTGACCGCT CGCGACGCCG ACACCGCTGT CGAGGCGGTC
GCTGCCGGGG CCAGCTACCT CGGGGTCGGG CCGGTGCATC CCACCACCTC AAAGGAGGGT
CTACCGCCCG CGATCGGGGT GGCGGGGGTC GGAGTGGTCG CCGCCGCGGT CAGCGTGCCG
GTGATCGCCA TCGGGGCAGT GACGGCAGCG GACGTGCCCG TTCTGCGGGC AGCGGGCGCG
TACGGAGTGG CGGTGATCGG CGCGCTCTCG CACGCTGCCG ACCCCGCCGG TGCCACCGCC
GCGCTGCTGG AGGCGCTGAC GTGGTGA
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| Protein sequence | MSSLGRLHLI TDARAGRNPL TVVQAALSVA RTELVVQVRV ADDATDRQAY DLARRVIALC
ARYDATCLVN DRLHVALAVG AAGGHVGADD LPVGAARAVL GSAAVLGVTA RDADTAVEAV
AAGASYLGVG PVHPTTSKEG LPPAIGVAGV GVVAAAVSVP VIAIGAVTAA DVPVLRAAGA
YGVAVIGALS HAADPAGATA ALLEALTW
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