| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3886 |
|---|
| Symbol | |
|---|
| ID | 5060364 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 4449309 |
|---|
| End bp | 4450079 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640476143 |
|---|
| Product | thiazole biosynthesis family protein |
|---|
| Protein accession | YP_001160694 |
|---|
| Protein GI | 145596397 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2022] Uncharacterized enzyme of thiazole biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCTTCG AACTGGGTGG GGTGCCGATC CCGTCGCGTC TGGTTCTTGG CACCGGCGGG
GCCGCCAACC TCACCGTCTT GGAAGAGGCG ATCCGGGCCT CCGGCACCGG CCTGGTCACC
GTGGCGCTGC GCCGGGTCGA CACCACCGGG GGCGCCGCGG GTGGCCTACT GGACCTGATC
GACCGCTGCG GGGTCCGGCT GCTACCAAAC ACCGCCGGCT GCTACACGGC AGGTGAGGCG
GTGAAGGTGG CCCAGCTGGC CCGGGAGGCG TTCGAGACCG ACTGGGTGAA GCTTGAGGTG
ATCGGCGACG AACGCACCCT GCTGCCCGAC GGAGTGGAGT TGTTACGGGC CGCGGAGGAG
CTGGTCGCCG ACGGGTTCAC CGTGCTGCCG TACACCTCGG ACGACCCGAT TTTGGCGCGT
CGGCTCGCCG ATGTCGGCTG CGCGGCGGTG ATGCCGGCGG GTGCTCCGAT TGGATCGGGG
CTCGGAGTGT CGAATCCGCA TCACATCCGG CTTATCCGGC AGAGCGTGGA GGTGCCGGTG
ATCTTGGATG CCGGGATCGG CACCGCCTCC GACGCGGCGC TCGCCATGGA GTTGGGCTGC
GACGCGGTGT TGCTGGCCAG CGCGGTGACT CGGGCCGCCG ATCCGGTGGC GATGGCGACG
GCGATGCGGT ACGCGGTCGA ATCCGGCCGG CTCGCGTACC GAGCCGGCCG GATTCCGCGT
CGCTTTCACG CCCTCGCCTC CACCCCGGAC GACGGGCGGC CAGAGCTGTG A
|
|---|
| Protein sequence | MTFELGGVPI PSRLVLGTGG AANLTVLEEA IRASGTGLVT VALRRVDTTG GAAGGLLDLI
DRCGVRLLPN TAGCYTAGEA VKVAQLAREA FETDWVKLEV IGDERTLLPD GVELLRAAEE
LVADGFTVLP YTSDDPILAR RLADVGCAAV MPAGAPIGSG LGVSNPHHIR LIRQSVEVPV
ILDAGIGTAS DAALAMELGC DAVLLASAVT RAADPVAMAT AMRYAVESGR LAYRAGRIPR
RFHALASTPD DGRPEL
|
|---|
| |