Gene Strop_3874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3874 
Symbol 
ID5060352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4435452 
End bp4435859 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content66% 
IMG OID640476131 
Productroadblock/LC7 family protein 
Protein accessionYP_001160682 
Protein GI145596385 
COG category[R] General function prediction only 
COG ID[COG2018] Uncharacterized distant relative of homeotic protein bithoraxoid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.215093 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGGC CAGCGACCAT GCAGGACATG GGTTGGCTGC TCAGTAACTT CGCCGACAGC 
GTGGCGGGCA TCGCCCACGT GGTCGCGGTG TCCGCCGATG GGCTGCTGCT TGCCTCGTCC
CGGGATCTGC CCGCGGACCG TGCAGATCAG CTTGCGGCGA TCACCTCCGG CGTGGTGAGC
CTGACCGACG GCGCGTCCCG CATGTTCAGC GCCGGCGGGG TGCTCCAGAC GGTTATCGAG
ATGGACAGCG GCTACCTCTT CCTGATGTCG ATCAGTGACG GCTCGTCGAT GGCGGTGCTC
GCCGCCCGCA GCTGCGACGT CGGTCAGGTC GGCTACGAGA TGGCACTTCT CGTGGAACGA
GTCGGTGCCG CACTGGTGCC GTTGCCTCGG GACGCGGTGT CTTCATGA
 
Protein sequence
MNRPATMQDM GWLLSNFADS VAGIAHVVAV SADGLLLASS RDLPADRADQ LAAITSGVVS 
LTDGASRMFS AGGVLQTVIE MDSGYLFLMS ISDGSSMAVL AARSCDVGQV GYEMALLVER
VGAALVPLPR DAVSS