Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3874 |
Symbol | |
ID | 5060352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4435452 |
End bp | 4435859 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640476131 |
Product | roadblock/LC7 family protein |
Protein accession | YP_001160682 |
Protein GI | 145596385 |
COG category | [R] General function prediction only |
COG ID | [COG2018] Uncharacterized distant relative of homeotic protein bithoraxoid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.215093 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGGC CAGCGACCAT GCAGGACATG GGTTGGCTGC TCAGTAACTT CGCCGACAGC GTGGCGGGCA TCGCCCACGT GGTCGCGGTG TCCGCCGATG GGCTGCTGCT TGCCTCGTCC CGGGATCTGC CCGCGGACCG TGCAGATCAG CTTGCGGCGA TCACCTCCGG CGTGGTGAGC CTGACCGACG GCGCGTCCCG CATGTTCAGC GCCGGCGGGG TGCTCCAGAC GGTTATCGAG ATGGACAGCG GCTACCTCTT CCTGATGTCG ATCAGTGACG GCTCGTCGAT GGCGGTGCTC GCCGCCCGCA GCTGCGACGT CGGTCAGGTC GGCTACGAGA TGGCACTTCT CGTGGAACGA GTCGGTGCCG CACTGGTGCC GTTGCCTCGG GACGCGGTGT CTTCATGA
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Protein sequence | MNRPATMQDM GWLLSNFADS VAGIAHVVAV SADGLLLASS RDLPADRADQ LAAITSGVVS LTDGASRMFS AGGVLQTVIE MDSGYLFLMS ISDGSSMAVL AARSCDVGQV GYEMALLVER VGAALVPLPR DAVSS
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