Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3869 |
Symbol | |
ID | 5060347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 4430348 |
End bp | 4432861 |
Gene Length | 2514 bp |
Protein Length | 837 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640476126 |
Product | nitrite reductase (NAD(P)H), large subunit |
Protein accession | YP_001160677 |
Protein GI | 145596380 |
COG category | [C] Energy production and conversion |
COG ID | [COG1251] NAD(P)H-nitrite reductase |
TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAACAG GCCGACTGGT CGTCGTCGGC AACGGCATGG TCGGGCAGCG GTTCGTGGAC GCGTTACGCG CCCGCGACAG CGACGGTCAG TGGCGGGTGA CCGTGCTCGG CGAGGAGTCC CGGCCCGCGT ACGACCGGGT GCGTCTCTCC GCCCTCTTCG ACGGGGTGGG CGCGGACGAG CTGAACCTGC ACACCCCGGA TCCACGGGTG CGGCTGCGGC TCGGTGCGCC GGTCACCGCG ATCGACCGGG CCCGACGCGT CGTGGCGACG ACCGAAGGTG AGTACCCGTA CGACGCGCTG GTGTTGGCCA CCGGCTCGTA CCCCTTCGTG CCGCCGATCG ACGGCGTCGA CCTGCCGGGC GTCTTCACCT ATCGCACGCT CGACGACCTG GCCGCGATCC GCACGCACGC CCAGGGCCGC CGGTGGGGCG CGGTGATCGG CGGTGGGCTG CTCGGCCTGG AGGCGGCGAA CGCGCTGCGG CTGCTCGGGC TCGCCACCAG CGTCGTGGAG TTCGCACCGC GGCTGATGCC GGTGCAGGTG GACACCGCCG GCGGGGCGCT GCTACGCCGA TACGTCGAGG AGCTGGGCGT CGCCTGCCAC CTCGGGGTCG CCACCAGCGC GCTGCACCCC GGCCCGGACG GCTCGGTGGC CCGGCTGGAG CTGGCGGACG GCGGGCGGGT GGACGCCGAC CTGGTCGTCG TGGCGGCCGG TATCCGCCCC CGGGACGAGC TGGCTCGCGC CGCCGGCCTG CCCCTTGGCC GCCGTGGCGG GGTGCTGGTC GACCGCACCT GCCGCAGCGC CGACGAGCGG ATCTGGGCGG TCGGCGAGTG CGCCGCCGTC GACGGCACCT GCCACGGTCT GGTCGCCCCC GGCTACGCGA TGGCGGAGAC GGTGGCCGAC CAGCTGGTCG GCGGGGCGGC CACCGTCCCC CACGCGGACA CCGCCACCAA GCTGAAGCTG CTCGGCGTGG ACGTCGCCTC CTTCGGCGAC GCGCACGGCA CCACCCCGGG CTCCCTCGAC GTGACCTTCA CCGATCCGGC CACCCGGGTG TACGCGAAGC TGGTCCTCTC CGATGATGCG CAGACGCTGC TCGGAGGCGT GCTGGTCGGC GACGCCGACG CGTACCCGAC GTTGCGGGCC AGCGTCGGCC AGGCGCTGCC CGCCGCGCCG CTCGCGCTGC TCGCCCCGGC CGGTGCGGGC ACCGGGGTGG CGACGCTTCC CGGCTCCACG CAGGTCTGCT CCTGTAACGC GGTGACCCGC GCCGACCTGG ACTCGGCGAT CGCCGGCGGC GCGACCGACG TACCGGCGCT CAAGGCGTGC ACCCGAGCCG GCACCAGCTG CGGCTCCTGC GTACCGATGC TCCGGCAGCT GCTCGACGCC GCCGGCGTTG GGCAGCCCCG CGGGCTCTGC GAACACTTCG AGGTGAGCCG CCAGGAGCTG TTCGACATCA TCCGGGTCCG GGGGATCCGC ACCTTCTCCA ACCTGATCGC CGATCATGGC CGGGGAGACG GCTGTGACAT CTGCAAGCCG GTGGTGGCGT CAATCCTGGC TTCCCTCGGC GCCGGGCACC TCCTCGACGG CGAGTGGGCG TCGCTACAGG ACACCAATGA CCACTTCCTG GCCAACCTGC AACGGGACGG CAGCTACTCG GTCGTGCCCC GGATCCCCGG CGGGGAGATC ACTCCGGAGA AGCTGATTGT GCTCGGTGAG GTGGCCCGGG ACTTCGCGCT CTACACGAAA ATCACCGGCG GGCAACGCAT CGATCTGCTC GGCGCGCGGG TGGAGCAGTT GCCGCAGATC TGGCGCCGGC TGGTCAACGC GGGCTTCGAA TCCGGCCACG CGTACGGCAA GGCGCTGCGG ACGGTGAAGT CGTGCGTCGG GTCCACCTGG TGCCGATACG GGGTGCAGGA CTCGGTCGGG TTGGCCATCG CGCTGGAGCT GCGCTACCGC GGGCTGCGCG CCCCCCACAA GATCAAGGCA GCGGTCTCCG GTTGTGCAAG GGAGTGTGCC GAGGCACGCG GCAAGGACTT CGGCATCATC GCCACCGACT CCGGCTGGAA CCTCTACGTC GGCGGCAACG GCGGATTCCG GCCCCGGCAC GCCGACCTCT TCGCCACCGA CCTGACCACC GAGGCGCTGG TACGGCTGGT CGACCGGTTC CTGATGTACT ACATCCGCAC CGCGGACCGG CTGCAACGTA CCGCCGCCTG GATCGAGGCG ATGGACGGCG GTCTGGAGCA CCTGAACGCG GTCATCGTGG ACGACTCACT CGGGCTATGC GCCGAGTTGG ACGCGGCGAT GGCCCGACAC ACTGCGTCGT ACTCCGACGA GTGGCGCGAC GTCCTCGAGG ATCCGGCGCG GCTGGGCCGG TTCGCCTCGT TCGTCAACGC CCCCGAGATG CCCGACCCCT CCATCCGCTT CACTGAGCAG CGCGGACAAC GGGTACCGGT GCGGGCCGGG GACACCGAGA ACCAGCAGCC GGTCGGGCTG GGGATGCCGC GGGTACCGCG ATGA
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Protein sequence | MRTGRLVVVG NGMVGQRFVD ALRARDSDGQ WRVTVLGEES RPAYDRVRLS ALFDGVGADE LNLHTPDPRV RLRLGAPVTA IDRARRVVAT TEGEYPYDAL VLATGSYPFV PPIDGVDLPG VFTYRTLDDL AAIRTHAQGR RWGAVIGGGL LGLEAANALR LLGLATSVVE FAPRLMPVQV DTAGGALLRR YVEELGVACH LGVATSALHP GPDGSVARLE LADGGRVDAD LVVVAAGIRP RDELARAAGL PLGRRGGVLV DRTCRSADER IWAVGECAAV DGTCHGLVAP GYAMAETVAD QLVGGAATVP HADTATKLKL LGVDVASFGD AHGTTPGSLD VTFTDPATRV YAKLVLSDDA QTLLGGVLVG DADAYPTLRA SVGQALPAAP LALLAPAGAG TGVATLPGST QVCSCNAVTR ADLDSAIAGG ATDVPALKAC TRAGTSCGSC VPMLRQLLDA AGVGQPRGLC EHFEVSRQEL FDIIRVRGIR TFSNLIADHG RGDGCDICKP VVASILASLG AGHLLDGEWA SLQDTNDHFL ANLQRDGSYS VVPRIPGGEI TPEKLIVLGE VARDFALYTK ITGGQRIDLL GARVEQLPQI WRRLVNAGFE SGHAYGKALR TVKSCVGSTW CRYGVQDSVG LAIALELRYR GLRAPHKIKA AVSGCARECA EARGKDFGII ATDSGWNLYV GGNGGFRPRH ADLFATDLTT EALVRLVDRF LMYYIRTADR LQRTAAWIEA MDGGLEHLNA VIVDDSLGLC AELDAAMARH TASYSDEWRD VLEDPARLGR FASFVNAPEM PDPSIRFTEQ RGQRVPVRAG DTENQQPVGL GMPRVPR
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