| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3865 |
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| Symbol | |
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| ID | 5060343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4424540 |
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| End bp | 4425907 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640476122 |
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| Product | nitrite transporter |
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| Protein accession | YP_001160673 |
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| Protein GI | 145596376 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2223] Nitrate/nitrite transporter |
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| TIGRFAM ID | [TIGR00886] nitrite extrusion protein (nitrite facilitator) |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.601015 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACGA GCGTGCCCGC GACGAGAACA GCGGAGGAGA TCGACCTGCA ACGTGGCAGG
GGCCGCTGGA TTGGCCACTG GGCTCCGGAG GACGATCATT TCTGGCGGAC CGCCGGCCGG
GCCGTTGCCC GGCGCAATCT CATCTTCTCC ATCTTTGCCG AGCACATCGG TTTCTCCGTC
TGGCTGCTCT GGAGCATCGT GGTGGTCCGG TTGGGTGATG TCGGGTGGAC GCTGACAACC
AGCCAGGCGC TCTGGCTGAC CGCCGTGCCC AGTGGCGTCG GGGCGCTGCT GCGACTGCCC
TACACCTTCG CGGTGCCGGT CTTCGGCGGG CGGAACTGGA CCGTGATCTC CGCCCTGCTG
CTGATCATCC CGGCTGCCGG GTTGGCCTGG GCGGTGCAGC ACCCGGAGAT CGGCTTCGTG
CCGTTGCTGC TGATCGCCGC CACCGCCGGG TTCGGCGGCG GGAACTTCGC CTCCAGCATG
GCGAACATTT CGTTCTTCTA TCCGGAGCGG GAGAAGGGGT GGGCGCTCGG GCTGAACGCG
GCGGGCGGCA ACATCGGGGT TGCCGTGGTG CAGTTCCTGG TGCCGCAGGT CATCGTGCTC
GGCGGTGGCC TCGCCCTGGC CCGAGCCGGC CTGATGTACC TCCCGCTCGC GGTGATCGCG
GCGGTCTGTG CCTACCTGTT CATGGACAAC CTGGCCGAGG CCAAGGCGGA TGTGGGGCCG
GTGTGGTCCT CGCTGCGGGA CCGGAACACC TGGATCATGT CGCTGTTGTA CGTCGGCACG
TTCGGTTCGT TCATCGGTTA CTCGGCGGCC TTCCCGACGC TGCTCAACGG GGTCTTCGGC
CGGCCCGACA TCGCGTTGTC CTGGGCCTTC CTCGGTGCGG CGGTGGGTTC ACTCTGCCGA
CCCTTCGGTG GCCGTCTCGC CGATACCATC GGTGGCGCCC GGGTCACCGT GGCCAGCTTC
ATGTTGATGA CCGCCGGTGC GTACCTGGCC CTGTGGTCGG TGCGGGAGCG CTGGCTGGAG
CTCTTCTTCC TGGCGTTCAT GGTGTTGTTC GTGGCCACCG GAGTCGGCAA CGGGTCGACC
TACCGGATGA TCTCTCGGAT CTTCCAGGTG CGGGGGGAGG AGCTCGGCGG TTCGCCGGAG
ATCATGCGCG CCATGCGCCG GCAGGCGGCC GGGGCGCTCG GGATCATCTC CGCGATCGGT
GCCTTTGGCG GCTTCCTGGT CCCGATCTGC TACGCGTGGG CGAAGTCGGC GTACGGCAGC
ATCCAGCCCG CGCTGTGGTT CTATGTCGGC TTCTTCCTGG TGCTGACCGC GCTGACGTGG
GCTGTGTACC TGCGACCGGG GGCGCGGCTG GCCTCGGCTC GGGTGTGA
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| Protein sequence | MTTSVPATRT AEEIDLQRGR GRWIGHWAPE DDHFWRTAGR AVARRNLIFS IFAEHIGFSV
WLLWSIVVVR LGDVGWTLTT SQALWLTAVP SGVGALLRLP YTFAVPVFGG RNWTVISALL
LIIPAAGLAW AVQHPEIGFV PLLLIAATAG FGGGNFASSM ANISFFYPER EKGWALGLNA
AGGNIGVAVV QFLVPQVIVL GGGLALARAG LMYLPLAVIA AVCAYLFMDN LAEAKADVGP
VWSSLRDRNT WIMSLLYVGT FGSFIGYSAA FPTLLNGVFG RPDIALSWAF LGAAVGSLCR
PFGGRLADTI GGARVTVASF MLMTAGAYLA LWSVRERWLE LFFLAFMVLF VATGVGNGST
YRMISRIFQV RGEELGGSPE IMRAMRRQAA GALGIISAIG AFGGFLVPIC YAWAKSAYGS
IQPALWFYVG FFLVLTALTW AVYLRPGARL ASARV
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