| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3864 |
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| Symbol | rplM |
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| ID | 5060342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4423855 |
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| End bp | 4424298 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640476121 |
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| Product | 50S ribosomal protein L13 |
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| Protein accession | YP_001160672 |
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| Protein GI | 145596375 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0102] Ribosomal protein L13 |
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| TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.545712 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCGTACGT ACAGCCCGAA GCCGGGTGAG ATCGAGCGTC AGTGGCACGT TATCGACGCC
TCTGATGTCG TGCTGGGCCG CTTGGCCACC CATGCCGCCA CGCTGCTGCG CGGCAAGCAC
AAGCCGACTT TCGCGCCGCA CGTCGACACG GGCGACTTCG TCGTCATCGT GAACGCCGGC
AAGGTCGCGC TGACCGGCAA CAAGCGGCAG CAGAAGATCG CCTACCGGCA CTCCGGTTAC
CCCGGCGGCC TCAAGCAGCT CGGCTACGAC GAGCTCCTGA CCAAGCGCCC CGAGCGGGCC
ATCGAGCTGG CCGTGAAGGG CATGCTCCCG CACAACAAGC TGGGCCGGAA GCTCATCAAG
AAGCTGAAGG TCTACGCCGG TGCCGAGCAC CCGCACGGCG CGCAGCAGCC AGTGCCGTTC
GAGATCAAGC AGATCGCGCA GTGA
|
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| Protein sequence | MRTYSPKPGE IERQWHVIDA SDVVLGRLAT HAATLLRGKH KPTFAPHVDT GDFVVIVNAG
KVALTGNKRQ QKIAYRHSGY PGGLKQLGYD ELLTKRPERA IELAVKGMLP HNKLGRKLIK
KLKVYAGAEH PHGAQQPVPF EIKQIAQ
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