Gene Strop_3863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3863 
SymbolrpsI 
ID5060341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4423370 
End bp4423834 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content69% 
IMG OID640476120 
Product30S ribosomal protein S9 
Protein accessionYP_001160671 
Protein GI145596374 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0103] Ribosomal protein S9 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.78601 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA TCATCGCCAC CGAGGTCGCC CCCGAGGCCG CCGAGGCGCT GGCGCCCGTC 
GTCCGCGCGC CCCTTGGTGA CCGGCCGATC CAGACCGTGG GTCGCCGCAA GGAGGCCATC
GTCCGGGTCC GCATCGTCCC GGGCACTGGC AAGATCACCT GCAACGGCCG GGATCTCGAG
GCGTACTTCC CGAGCAAGGT GCACCAGCAG CTGATCAAGG ATCCGCTGGT CACCACCGAG
AAGGCGGAGG AGTTCGACGT CATCGCGAAC CTGCGTGGCG GCGGCACCAC CGGTCAGGCC
GGTGCGCTCC GGCTGGCCAT CGCCCGCGCG CTGATCGCCA GCGAGCCGGA CGACCGCCCG
GCGCTCAAGA AGGCCGGCTT CCTGACCCGG GATGCGCGGG CCAAGGAGAG CAAGAAGTAC
GGCCTCAAGA AGGCCCGTAA GGCTCCTCAG TACTCGAAGC GCTGA
 
Protein sequence
MTDIIATEVA PEAAEALAPV VRAPLGDRPI QTVGRRKEAI VRVRIVPGTG KITCNGRDLE 
AYFPSKVHQQ LIKDPLVTTE KAEEFDVIAN LRGGGTTGQA GALRLAIARA LIASEPDDRP
ALKKAGFLTR DARAKESKKY GLKKARKAPQ YSKR