| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3857 |
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| Symbol | |
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| ID | 5060335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4415340 |
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| End bp | 4416458 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640476114 |
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| Product | alanine racemase |
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| Protein accession | YP_001160665 |
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| Protein GI | 145596368 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0787] Alanine racemase |
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| TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.859951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.532248 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGCAGG CCGAGGTACG CGTCGACCTT GACGCGATCC GTGAGAACGT GAGTTGGTTG
CGCTCCGGTA GCGCCGCCGA GTTGATGGCG GTGGTCAAGG GGGACGGGTA CGGCCACGGC
ATGGTCCCGG CCGCCCACGC CGCGCTGGAT GGTGGCGCCG ACTGGCTCGG TGTCTGCACC
CTCGATGAGG CGCTCACCCT GCGCCGGGCA GGGATCACCG TGCCGGTTCT GGCCTGGCTG
CTCGCGCCGG GCCTGCCGTT ACACGAAGGC GTGACGGCCG GGATTGACCT CGGCGTAGCC
AGCGTGGCGC AGCTCGAGGA GATGGTCGAG GCGGGCCGGG TGGCCGGGCG TCCGGCCCGA
CTGCACCTCA AGATCGACAC AGGGCTGTCC CGAGGTGGCG CGACCATCTC GGAGTGGCCG
GAGCTGCTCG ACGCCGCGGC GAAGGCGCAG GCGGACGGCG CGGTCGAGGT GGTGGGGGTG
TGGAGCCACT TCGTGTACGC GGACGCACCC GGACACCCGA CCACCGACCG GCAGCTCGCC
GTCTTCCACG AGGGGCTGGG CATGGTGGAG AAGGCGGGAC TGCGCCCGCG CTACCGCCAC
CTGGCCAACT CGGCGGCCAC GCTGACCCGG CCGGACGCCC ACTTCGACCT GGTCCGTCCC
GGGCTGGCCG TCTACGGGCT CTCTCCGGTG GCCGGGGAGC GCTTCGGCCT GCGGCCGGCG
ATGACCGCCC GGGCCCGTGT CATGCTCACC AAGCAGGTCC CGGCCGGAGC CGGGGTCTCC
TACGGCCACA CGTACACCAC CGATCGGGCG AGCAACCTCG CGGTGATTCC ACTCGGGTAC
GCCGACGGGG TCCCCCGGGA CGCGTCCAAC AGCGGCCCGG TGCAGCTCGG TGGCGTCCGG
CGGACCATCT CCGGCCGGGT CTGCATGGAC CAGTTCGTGC TCGACTGCGG CGACGATCCG
GTCGCGCCGG GAGACGTGGC CACCCTCTTC GGCACCGGGA GGGACGGTGA GCCCACCGCC
GACGACTGGG CCGAGGCGGT CGGCACGATC AACTATGAGA TCGTCACCCG ATTCGGCAGC
ACCCGGGTGC CCCGCTGCTA CGACGGCGAG CGTCCGTGA
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| Protein sequence | MWQAEVRVDL DAIRENVSWL RSGSAAELMA VVKGDGYGHG MVPAAHAALD GGADWLGVCT
LDEALTLRRA GITVPVLAWL LAPGLPLHEG VTAGIDLGVA SVAQLEEMVE AGRVAGRPAR
LHLKIDTGLS RGGATISEWP ELLDAAAKAQ ADGAVEVVGV WSHFVYADAP GHPTTDRQLA
VFHEGLGMVE KAGLRPRYRH LANSAATLTR PDAHFDLVRP GLAVYGLSPV AGERFGLRPA
MTARARVMLT KQVPAGAGVS YGHTYTTDRA SNLAVIPLGY ADGVPRDASN SGPVQLGGVR
RTISGRVCMD QFVLDCGDDP VAPGDVATLF GTGRDGEPTA DDWAEAVGTI NYEIVTRFGS
TRVPRCYDGE RP
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