Gene Strop_3844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3844 
Symbol 
ID5060322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4404855 
End bp4405337 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content69% 
IMG OID640476101 
ProductybaK/ebsC protein 
Protein accessionYP_001160652 
Protein GI145596355 
COG category[S] Function unknown 
COG ID[COG2606] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00011] ybaK/ebsC protein 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCAAC GACAGGTGAC GCCGGCGACC ACGCTGCTGA ACAAGCGGAA AGTCAGGTAC 
CGCACCCATC CGTACGACGT CCCGGCGGAC GCCGCGAACT ATGGAGCGCT GGTGGCAGCG
ACGCTCGGCC TACCGGCGGA CCGCGTGTTC AAGTCACTGG TGGCCGTGGT CGATGACGCG
CTCACCATCG TGGTCGTCCC GGTGTCCGGC GAACTCGGCC TCAAAGCCCT GGCCGCCGCA
GTCGGCGCCA AACGGGCCGT GCTGGCCGAC CGGACAACGG CCGAACGTGT CACCGGGTAC
GTCCGCGGCG GCATCAGTCC GCTCGGACAG CGGCGCAACC TGCCGACCGT GCTCGACGAG
AGCGCCCTTC ACCACGAGAC CATCTACGTC TCCGCTGGCC GTCGGGGGCT CCAGCTGGAA
CTGGCCCCAC AGGATCTGGT CGCCCTCACC AACGCCCGAA TGGCACGGGT CGCCTCCGAC
TAG
 
Protein sequence
MAQRQVTPAT TLLNKRKVRY RTHPYDVPAD AANYGALVAA TLGLPADRVF KSLVAVVDDA 
LTIVVVPVSG ELGLKALAAA VGAKRAVLAD RTTAERVTGY VRGGISPLGQ RRNLPTVLDE
SALHHETIYV SAGRRGLQLE LAPQDLVALT NARMARVASD