| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3828 |
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| Symbol | |
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| ID | 5060306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 4385255 |
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| End bp | 4386508 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640476086 |
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| Product | phosphatidylserine decarboxylase related protein |
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| Protein accession | YP_001160637 |
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| Protein GI | 145596340 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0688] Phosphatidylserine decarboxylase |
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| TIGRFAM ID | [TIGR00164] phosphatidylserine decarboxylase precursor-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.458299 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGT CCCCCGCCGT GCTTCCCACC GGCCGGTCCG GTCCGGTCCG CATCGGCGAG
CGCGCCGCCC GTGTCCTCGT CTCGGAACTC GCCCGAATCA ACGAGCCGAA GGCGGCCCTG
CTGGTTGACG CCAGCCCGGA GTCCCTGGTG CTCGTCGCGG CGATCGAGGC GCTGTTGCCC
GGTGACACGC TCACCGTCGT ACCGGCCGTG GCGTCGGACG CCGGGATGCT GCGCGAGCAC
GTAGCCGCCC AGGGTCCCTG GGTCGCCGAG CGGGTCCGGG TCGTTGACGC GCTGGCCGAC
GCCGAGGCGG CGGCGGTGGC GATCATCGGT GAACCGCTCA CCGGGACGGT GGAGGAGACC
CGTGCCACCC TCGACGGGCT CGGTAGGCAC CTCGACACCG GAGCCGTGTT GAGCGTCGCC
ACACCCGCCA CCCCCAAGCG CACCGGCGGC GCGGCCGACG AACTGGACCG CCAGGCCGCG
CTGCACGGCG TCGGTAGCGA CCTGCTGCTG CGCAACAACC CACCGCTGCG AGTGCACCGA
CTCCGTTTCC GCCCGGCCAG CGCGGCGGCG GCGGTGGGGA TGGCGCCGGC GTACCGGCCC
TCCAGCGTGC CGCTGACCCG CACGATGCAC ATCGACAGCA ACGGGGTGGC TGCCGCCGGA
ATCGCCCTCG GGCTGGCGGC GGTGGCCCGC GTCGCCCGGC CGACGTCGAA GCTGTGGCTG
TTGCCGGCCC TCGCCACCGC ACCGGTCGCC GCCTTCTTCC GGGACCCGGA GCGGGAGGTG
CCAGCGGATC CGTCCGCGGT GGTGGCCTCG GCCGACGGCA AGGTGCTCTC CGTACAACGG
CTCTCCGACG AACGGTTCGG CGAGGGCGAG TGGCTACGGA TCGCGGTATT CCTGTCGGTG
CTCGACGTCC ACATCAACCG CTCCCCGGTG CCGGGCAAGG TGGTCGACTA CTTCGTGACC
GACGGCGGCT TCGCCAACGC GATGAAGCCT GATGCGGAAC ACAACGTCGC CGCGTACACC
GTGTTGGACA CCACGAACGG AACGGTGATC GTGGCGCAAC GTACCGGATT GATCGCCCGG
CGGATCGTGC AGCGGGCGCC CATCGGGTCG CTGCTCGCCA AGGGCGAGCG GTTCGGGCTG
ATCAGGTTCG GCTCACGCAC CGACGTCTAC CTGCCGGCCG ATGCGGCGCA GCCGCTGGTC
GGGCCCGGCG ATCGGGTCGT GGGTGGATCG TCGGTAATCG CCCGCTGGCA CTGA
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| Protein sequence | MTQSPAVLPT GRSGPVRIGE RAARVLVSEL ARINEPKAAL LVDASPESLV LVAAIEALLP
GDTLTVVPAV ASDAGMLREH VAAQGPWVAE RVRVVDALAD AEAAAVAIIG EPLTGTVEET
RATLDGLGRH LDTGAVLSVA TPATPKRTGG AADELDRQAA LHGVGSDLLL RNNPPLRVHR
LRFRPASAAA AVGMAPAYRP SSVPLTRTMH IDSNGVAAAG IALGLAAVAR VARPTSKLWL
LPALATAPVA AFFRDPEREV PADPSAVVAS ADGKVLSVQR LSDERFGEGE WLRIAVFLSV
LDVHINRSPV PGKVVDYFVT DGGFANAMKP DAEHNVAAYT VLDTTNGTVI VAQRTGLIAR
RIVQRAPIGS LLAKGERFGL IRFGSRTDVY LPADAAQPLV GPGDRVVGGS SVIARWH
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