| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3822 |
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| Symbol | |
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| ID | 5060300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4378364 |
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| End bp | 4379374 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640476080 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001160631 |
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| Protein GI | 145596334 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.922354 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCGCT ACGTCATTCG ACGGTTGCTC CAGTTCATCC CGACCGTGCT GGGCACCATG
TTCCTGCTCC ACTACATGAC CTCGCTGGCG ATTCAGTTCA GCGGGAACCC GGTCCGAGCC
ATCTTCGGTG ACCGGACCCC GCCGCCGGCC CTACTCCAGG CGGTCACCGA CCGACTCGGC
TACGGTGACC CCTGCCTCGA GCAGAAGGGC AACCCCTGCT TCGGGCTCTT CCTCGACCGG
GTGAGCGGAG TCTTCCTGCA CTTCGACTTC GGCATCGACC TGCGGCGGCA GGAGGTCACC
GACCTGGTGG CCAATGCCGT TCCATTCACC CTGAAGCTGC TGGTGATCGC GATTGTCTTC
GAGGCCGTCG TCGGTATCGC CGCCGGTGTG TGGGCGGGTC TGCGGGGCGG CAGCTTCGCG
GACAACCTTG TCAAGATCAG CACCGTCTTC GTGATCTCTG TGCCGATCTT CGTGCTCGGT
ATCGTGGTGC GGGAGTTCAT CGGGGTCAAG TTCGGCAACA TCCTGCGTGA TCAGGAGTGG
ATCCCCGACG TCGTCGCGTA CGGGTTCTTC AGCCCCGGCT TCAAGCCGGA CTACCCGTTC
GCCAGTCTCC TGATCCCCGG CATGGTGCTC GGCGCGGTGG CGCTCGCCAC CACCGCGCGT
CTGACCCGGA CCAGCATCAT GGAGAACATC CGGGCGGACT ACGTCCGGAC CGCACGGGCG
AAGGGCCTGG CGAACAAGCG GGTCATCGGC GTGCACACGC TGCGTAACTC GCTGATTCCG
GTGATCACGT ACCTCGGCGT CGACATCGGT TCGGCGATGG CGGGCGCGGT GGTCACCGAG
ACCATCTTCA ACGTGCCCGG TATCGGCCGA CTGGTGACGA GTGCCGCCCG GGATGGAGAG
TCGTCCGTGG TCATCGGCGT GGTGACCATG CTGGTGTTGG TCGTTCTGCT CGCCAACCTG
TTGGTCGACC TCCTGTACGC CGTCCTCGAC CCGAGGATCC GCTATGAGTG A
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| Protein sequence | MGRYVIRRLL QFIPTVLGTM FLLHYMTSLA IQFSGNPVRA IFGDRTPPPA LLQAVTDRLG
YGDPCLEQKG NPCFGLFLDR VSGVFLHFDF GIDLRRQEVT DLVANAVPFT LKLLVIAIVF
EAVVGIAAGV WAGLRGGSFA DNLVKISTVF VISVPIFVLG IVVREFIGVK FGNILRDQEW
IPDVVAYGFF SPGFKPDYPF ASLLIPGMVL GAVALATTAR LTRTSIMENI RADYVRTARA
KGLANKRVIG VHTLRNSLIP VITYLGVDIG SAMAGAVVTE TIFNVPGIGR LVTSAARDGE
SSVVIGVVTM LVLVVLLANL LVDLLYAVLD PRIRYE
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