Gene Strop_3819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3819 
Symbol 
ID5060297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4375302 
End bp4376312 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content68% 
IMG OID640476077 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001160628 
Protein GI145596331 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.940493 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGACA TCGTGCTGGA GGCCCGTGAC CTGGTGAAGC ACTTCCCGCT GACCCAGGGG 
ATCCTCTTCA AGCGGCAGAT TGGCGCGGTT CGCGCGGTCG ATGGGATCAA CCTGCAGCTG
CGCCGGGGTG AGACCCTCGG CATCGTCGGC GAGTCTGGCT GCGGCAAGTC GACCCTGGCC
CGGATGCTGG TGGGACTGGA GACCCCCACC TCCGGAGACC TGTTCGTGCA GGGCCGGAAC
ATGGCGAAGG TCAGCGGCTC CGAGCGGCGT CGTGGCCGGC GCAACATCCA GCTGGTGATG
CAGGATCCGT ACACGTCGCT CAACCCGCGG ATGACCGTCG GCGACATCGT CGGCGAGCCG
TTCGAGGTGC ACCCCGAGGT GCTGGCGAAG CCCCAGCGGC GGGCCCGGGT CCAGGAGCTG
CTGGATCTGG TCGGTCTGAA CCCCGACCAC ATCAACCGGT ACCCGCACCA GTTCTCCGGC
GGCCAGCGCC AGCGCATCGG TATCGCCCGC GCGCTGGCGC TCAACCCGGA AATCATTCTG
TGTGACGAGC CGGTCTCCGC CCTGGACGTG TCGATCCAGG CGCAGGTGAT CAACCTGCTG
GAGAAGCTCC AGGACGAGTT GGGGCTGTCG TACATCTTCA TCGCGCACGA TCTGTCCGTG
GTGCGGCACA TCGCCGACCG AGTCGCGGTG ATGTATCTCG GTCGGGTCGT CGAGATCGGC
ACCGAGGACC AGATCTACGA GAACCCCACC CACCCGTACA CGCAGGCGCT GCTCTCGGCG
GTGCCGGTGC CGGATCCGAA GCTACGGGGT ATGCGGGATC AGATCGTCCT GACCGGTGAC
GTTCCGTCGC CGGCCAACCC GCCCTCGGGC TGCCGTTTCC GGACCCGCTG CTGGAAGGCG
CAGGAGATCT GCGCCCAGCA GGAGCCGGCG CTGGCCGTCC GGGAGAGTTC GGCCCACCCG
AGCGCCTGCC ACTTCGCCGA GGTTCGGGAC GTGGTGCACG CGCAGCGGTA G
 
Protein sequence
MSDIVLEARD LVKHFPLTQG ILFKRQIGAV RAVDGINLQL RRGETLGIVG ESGCGKSTLA 
RMLVGLETPT SGDLFVQGRN MAKVSGSERR RGRRNIQLVM QDPYTSLNPR MTVGDIVGEP
FEVHPEVLAK PQRRARVQEL LDLVGLNPDH INRYPHQFSG GQRQRIGIAR ALALNPEIIL
CDEPVSALDV SIQAQVINLL EKLQDELGLS YIFIAHDLSV VRHIADRVAV MYLGRVVEIG
TEDQIYENPT HPYTQALLSA VPVPDPKLRG MRDQIVLTGD VPSPANPPSG CRFRTRCWKA
QEICAQQEPA LAVRESSAHP SACHFAEVRD VVHAQR