| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3817 |
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| Symbol | |
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| ID | 5060295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4372172 |
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| End bp | 4374559 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640476075 |
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| Product | ATP-dependent DNA helicase PcrA |
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| Protein accession | YP_001160626 |
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| Protein GI | 145596329 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01073] ATP-dependent DNA helicase PcrA |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.558809 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCCTC TCTTTGACAT TCCCGTGCCC TCGTCCGCGC CCGACCCTGC TCCGCCGCGA
CGACCCACTC CGGCGCGCCT CGACCCGCAG GCGCTGCTCG ACGGGCTGAA CGGCCCCCAG
CGGGAAGCGG TTACCCATGC CGGGTCACCG CTGCTCATCG TGGCCGGAGC CGGTTCCGGC
AAGACCCGGG TGCTCACCCA CCGGATCGCC TACCTGCTGG CGGCCCGACA GGTGCACCCA
GGCGAGATCA TCGCGATTAC CTTCACCAAC AAGGCCGCGG GCGAGATGAA GGAGCGGGTG
GCCCAGTTGG TCGGGCCGCG TGCTCGGTTG ATGTGGGTCT CGACCTTCCA CTCGGCGTGT
GTCCGCATCC TGCGGGCCGA GCACGAGCAT GCGGGTTTGA AGTCGACTTT CTCGATCTAT
GATGCCGACG ACTCCCGTCG GCTGATGCAG CTGGTCGCCC GGGAGTTGGA CCTCGACCCG
AAGCGCTACC CGGCGCGGGG GCTGGCCGCC CAGGTCTCGA ATCTGAAGAA CGAGCTGGTT
GACCCCGAGG AGTTCGCCGC CCGGGCCAAG GGGCCGAACG AGCGGGCACT CGCCGAGGCG
TACACGCTCT ATCAGCGGCG GCTCCGTGAG GCGCACGCGC TGGACTTCGA CGATCTGATC
ATGACGACGG TGCACCTGCT CCAGTCGCAT CCGCACGTCG CGGAGACCTA CCGGCGTCGG
TTCCGACACG TGCTGGTTGA CGAGTACCAG GACACCAACC ACGCCCAGTA CGTGTTGATC
AAGGAGCTGG TGTCGGGTAC CGACGGGCTT GACCCGGCGG AGCTCTGCGT GGTGGGTGAC
GCCGACCAGT CGATCTACGC GTTCCGGGGC GCGACGATCC GCAACATCCT GGAGTTCGAG
CGGGACTTCA CCGATGCTCG GACGATCCTG CTGGAACAGA ACTACCGCTC CACCCAGACC
ATCCTGAACG CGGCCAACGC CGTGATCGAC CGCAACACCT CCCGTAAGCC CAAGCGGCTG
TGGAGTGAGG CCGGGACCGG CGACCCGATC GTCGGCTACG TCGCCGACAC CGAGCACACC
GAGGCCGACT GGGTGGCCCG GGAGATCGAC CGGCTTGTGG ACGACGGCGA CACCCGGCCG
GGGGACGTGG CGGTCTTCTA TCGGACCAAC GCCCAGTCCC GGGTCTTCGA GGAGGTGTTC
ATCCGCGTCG GCCTGCCCTA CAAGGTCGTC GGTGGAGTCC GCTTCTACGA GCGTAAGGAG
GTCCGGGACG CCCTGGCCTA CCTGCGGGCG TTGGTCAACG AGGACGATAC GGTCAGCCTT
CGTCGGGTGC TGAACACTCC CCGCCGGGGC ATCGGGGATC GAGCCGAGGC ATGTGTCGAG
GCGCTTGCCA GCCGGGACCG GATCTCCTTC GGCGCTGCCC TTCGCCGGGC CAGGGACGCG
CCGGGCATCT CCACTCGGGC GGCGAACGGC ATCGCGGAGT TCGTCGCGCT GCTCGACGGT
GTCCGGGAGG TCGCGGAGAC CAGCGCGCCC GAGGAGGTGC TGGAGGCGCT GCTGAACCGG
TCGGGGTACC TGACCGAGCT GGAGGAGAGC CTGGACCCGC AGGACGCCGG CCGGGTCGAC
AACCTCCAGG AACTGGTCAG CGTCGCCCGG GAGTACACGG AACGGGTGGA GGGCCTGGGC
GAGGAGGGCG AGCGGGCCAC TGTCGCGGGC TTCCTGGAGC AGGTCGCGCT GGTGGCCGAC
GCGGACCAGT TGCCCGCCGA CGACCCGGAG CACCAGGGGG TGGTCACCCT GATGACGCTG
CACACTGCCA AGGGGCTGGA GTTTCCGGTG GTGTTCCTGA CCGGGATGGA GGACGGGGTC
TTCCCGCACG CCCGTACCTT CGGCGACAAC CACGAGTTGG AGGAGGAACG GCGTCTGGCG
TACGTGGGGA TCACCCGGGC CCGGCAGCGT CTCTACCTGT CTCGGGCGGT CACCCGCTCG
GCGTGGGGCC AGCCGGCCTA CAACGCGCCG TCCCGGTTCC TCGAGGAACT GCCCGCGGAG
TTGGTGCGCT GGGAGCGCAC CGAGGGCTCG TACACCTCGT GGGCCGGCGG CGGCGGAGGC
GTGGGCGGTC GCGCGGACCG GGGGCAGGGC GGCTTCACCG GTGGTACGCC GAAGGCCGCG
CAGCTCGCAC GTCGGCTCGG CGTTGACGGT AGTCGCCTCG CCACGGCCAG CGAGTTGCCG
TCAGCGCCCC CGCGGGTCGC GGTCGGAGAC CGGGTCAACC ACCAGCGGTA CGGGCTGGGT
CGGGTACTCA CGGTGGAAGG GCATGGTCCA GGTGCCCGTG CTCAGATCGA CTTCGGCGAC
CAGACGCTCT GGCTGGTCCT CCGGCACGCA CCGATCGATC GGCTGTGA
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| Protein sequence | MHPLFDIPVP SSAPDPAPPR RPTPARLDPQ ALLDGLNGPQ REAVTHAGSP LLIVAGAGSG
KTRVLTHRIA YLLAARQVHP GEIIAITFTN KAAGEMKERV AQLVGPRARL MWVSTFHSAC
VRILRAEHEH AGLKSTFSIY DADDSRRLMQ LVARELDLDP KRYPARGLAA QVSNLKNELV
DPEEFAARAK GPNERALAEA YTLYQRRLRE AHALDFDDLI MTTVHLLQSH PHVAETYRRR
FRHVLVDEYQ DTNHAQYVLI KELVSGTDGL DPAELCVVGD ADQSIYAFRG ATIRNILEFE
RDFTDARTIL LEQNYRSTQT ILNAANAVID RNTSRKPKRL WSEAGTGDPI VGYVADTEHT
EADWVAREID RLVDDGDTRP GDVAVFYRTN AQSRVFEEVF IRVGLPYKVV GGVRFYERKE
VRDALAYLRA LVNEDDTVSL RRVLNTPRRG IGDRAEACVE ALASRDRISF GAALRRARDA
PGISTRAANG IAEFVALLDG VREVAETSAP EEVLEALLNR SGYLTELEES LDPQDAGRVD
NLQELVSVAR EYTERVEGLG EEGERATVAG FLEQVALVAD ADQLPADDPE HQGVVTLMTL
HTAKGLEFPV VFLTGMEDGV FPHARTFGDN HELEEERRLA YVGITRARQR LYLSRAVTRS
AWGQPAYNAP SRFLEELPAE LVRWERTEGS YTSWAGGGGG VGGRADRGQG GFTGGTPKAA
QLARRLGVDG SRLATASELP SAPPRVAVGD RVNHQRYGLG RVLTVEGHGP GARAQIDFGD
QTLWLVLRHA PIDRL
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