| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3816 |
|---|
| Symbol | |
|---|
| ID | 5060294 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 4371271 |
|---|
| End bp | 4372122 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640476074 |
|---|
| Product | peptidase M23B |
|---|
| Protein accession | YP_001160625 |
|---|
| Protein GI | 145596328 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAGAACG ACACCCCCCG CTCGAGCAGG AACACCGCAC CGGCCCGCCA CCGGCGACCG
ACCAGCACCC GAGGCCGGGT GCTGCGCGCC ACAGTCGCCG CGGTAGCCGG ACTCGCCCTC
ACCGGAGTCG CGGTAACAGC GATCACCGGA GATGACCAGG ACGCCGCACG GAACGGTGCC
GTCGACATCG ACCTGCGGAC TCAGACCGAG GCCCGGGCCC AGGCCGAAGC CGCCGCCCAA
GCCGAAGCCG CCGCCCAAGC CGAAGCCGCC GCCCAAGCCG AAGCCGCCGC TCGCGCTGAA
GCCGCCGCCC GCGCCGATCG CTCCGCCCGG GAGTCGGCGA GCAGCAGTCC GACCCCCAGC
GCGTCGGCGA GCCCCACGGA GCGGCCCTCG GTCAGCGCGA CACCGAAGGT GACGGCCAAG
CCGGCAACCA CGACAACCAC CGCGTCGACG CCGACCTGGG TCATCCCCAT GGCCGATGCC
ACCATCACCT CCTGTTACGG ATCGCGGTGG GGAATGCTGC ACGCCGGTAT CGACTTCGCC
ATGCCCGCCG GCACCCCGGT CCACGCCGCC TTCGGCGGCA CCGTGACGAA GGCCAGCGAC
GCTGGCGACG GGTACGGCAT CTCGGTCATC ATCGACCACG GCAACGGATA TCTGACCCAC
TACGCCCACC TCAGCACCGC GAAGGTAAGC GTCGGCGGCC AGGTCGGTGC CGGTGACCCC
ATCGGTCTGG AGGGCTCCAC CGGCGACTCC ACCGGCCCGC ACCTGCACTT CGAGGTACAC
CAGGGTCAGC TGTGGAACCA GATCGACCCG GCGCCTTTCC TCCGCGAACG CGGCATCGAC
GTGGCCTGCT GA
|
|---|
| Protein sequence | MQNDTPRSSR NTAPARHRRP TSTRGRVLRA TVAAVAGLAL TGVAVTAITG DDQDAARNGA
VDIDLRTQTE ARAQAEAAAQ AEAAAQAEAA AQAEAAARAE AAARADRSAR ESASSSPTPS
ASASPTERPS VSATPKVTAK PATTTTTAST PTWVIPMADA TITSCYGSRW GMLHAGIDFA
MPAGTPVHAA FGGTVTKASD AGDGYGISVI IDHGNGYLTH YAHLSTAKVS VGGQVGAGDP
IGLEGSTGDS TGPHLHFEVH QGQLWNQIDP APFLRERGID VAC
|
|---|
| |