| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3799 |
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| Symbol | |
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| ID | 5060277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 4354314 |
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| End bp | 4355408 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640476057 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_001160608 |
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| Protein GI | 145596311 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTCCCG TGCGCGGGAA CCGGCACACC CGTGGCAGCG AGCGAAAGGC AGGCGCTGTG
TCCCAGTCCG CCGTCCAACC CACGCCCGCC TCCCCCACTC CGGAGGGCGG CCACCTGCTC
GAGGTACGGG ACCTGCACGT CGAGTTCCGC ACCGGAGAAG GCGTGGCGAA GGTGATCAAC
GGTGTCTCGT ACCACCTGGA CGCCGGAGAG ACCCTCGCCG TGCTCGGCGA ATCCGGCTCC
GGCAAGTCGG TCACCGCCCA GGCAATCATG GGCATCCTGG ACACCCCGCC CGCGGTGATC
CGCAGCGGGC AGATCCGCTA CCAGGGGCGC GACCTACTCT CCCAGTCGGA GGAGCAGCGC
CGGCAGGTAC GCGGCACCGA GATCGCCATG ATCTTCCAGG ATGCGCTCTC CGCGCTGAAC
CCGACCTTCC CTGTCGGCTG GCAGATCGGC GAGACGCTGC GCCAACGGGC CGGGATGTCC
CGTGGCGACG CCCGCCAACG CGCGATCGAA CTGATGGAGC TGGTGAAGAT TCCGGCCGCG
GCCAACCGGC TCGGCGACTA CCCGCACCAG TTCTCCGGCG GGATGCGACA ACGCGTCATG
ATCGCCATGG CGTTGGCGCT GAACCCGAAG GTCCTCATCG CCGACGAGCC GACGACCGCG
CTGGACGTGA CCGTGCAGGC CCAGATCATG GACCTCCTGG CCGACCTGCG CCGAGACCTC
CGCATGGCGA TGATCCTGAT CACCCACGAC CTCGGCGTGG TAGCCGGGGT CGCCGACCGG
ATCGCCGTCA TGTACGCCGG GCGGATCGTC GAACACGCCG ACGTCCGCTC GCTGTACAAG
TCCCCGGCCC ATCCATACAC CAAGGGGTTG TTGGAATCGA TCCCGCGGCT GGACTTCCAC
GGCCAGCAAC TGTCGACCAT CCGGGGCCTG CCGCCGAACC TGATGCGGAT CCCCTCCGGC
TGCCCCTTCC ACCCCCGGTG CCCCTACGTC CAGCAGGTCT GCGTGGACGT CGTACCGCAC
GACCTGGTCC TCGGCGACGG CCGGACCAGC GCGTGCCACT TCGCGCAGGA GGTCCGCGAT
GACCGCGCCC GCTAG
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| Protein sequence | MSPVRGNRHT RGSERKAGAV SQSAVQPTPA SPTPEGGHLL EVRDLHVEFR TGEGVAKVIN
GVSYHLDAGE TLAVLGESGS GKSVTAQAIM GILDTPPAVI RSGQIRYQGR DLLSQSEEQR
RQVRGTEIAM IFQDALSALN PTFPVGWQIG ETLRQRAGMS RGDARQRAIE LMELVKIPAA
ANRLGDYPHQ FSGGMRQRVM IAMALALNPK VLIADEPTTA LDVTVQAQIM DLLADLRRDL
RMAMILITHD LGVVAGVADR IAVMYAGRIV EHADVRSLYK SPAHPYTKGL LESIPRLDFH
GQQLSTIRGL PPNLMRIPSG CPFHPRCPYV QQVCVDVVPH DLVLGDGRTS ACHFAQEVRD
DRAR
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