| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3793 |
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| Symbol | |
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| ID | 5060271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4346984 |
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| End bp | 4348198 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640476051 |
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| Product | isocitrate dehydrogenase |
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| Protein accession | YP_001160602 |
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| Protein GI | 145596305 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0538] Isocitrate dehydrogenases |
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| TIGRFAM ID | [TIGR00127] isocitrate dehydrogenase, NADP-dependent, eukaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0923125 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAAGA TCAAGGTAAA CAACCCGGTC GTAGAGCTCG ACGGCGACGA GATGACCCGG
ATCATCTGGA AGCAGATCCG GGAGCAGCTG ATCCTGCCCT ACCTCGACGT CGACCTGCGG
TACTACGATC TCTCGATCCA GCACCGGGAC GAGACGGACG ACCAGGCCAC CGTTGACGCC
GCCAACGCGA TCAAGGAGCA CGGCGTCGGC GTCAAGTGCG CCACGATCAC GCCGGACGAG
GCGCGGGTCG AGGAGTTCGG CCTGAAGAAG ATGTGGCGGT CGCCGAACGG CACCATCCGC
AACATCCTCG GTGGCGTCGT CTTCCGTGAG CCGATCATCA TGTCCAACGT GCCGCGGCTG
GTGCCCGGTT GGACGAAGCC GATCATCATC GGCCGGCACG CCCACGGTGA CCAGTACAAG
GCCAGCGACT TCGTCGTCCC CGGGCCCGGC AAGGTCACCA TCACCTACAC CCCGACCGAC
GGCACCCAGC CGGTCGAGAT GGAGATCGCC GACTTCCCCG GCGGCGGGGT CGCCATGGGC
ATGTACAACT TCGACGAGTC GATCCGGGAC TTTGCCCGTG CCTCCATGCG GTACGGCCTC
GACCGTGGCT ACCCGGTCTA CCTGTCGACC AAGAACACCA TCCTCAAGGC GTACGACGGC
CGGTTCAAGG ACATCTTCGC CGAGGTCTAC GAGGCCGAGT TCAAGGCCGA CTTCGAGGCT
GCCGGCATCA GCTACGAGCA CCGGCTGATC GACGACATGG TCGCCGCGGC GCTCAAGTGG
GAGGGCGGCT TCGTCTGGGC CTGCAAGAAC TACGACGGTG ACGTGCAGTC CGACACCGTC
GCGCAGGGCT TCGGCTCGCT CGGCCTGATG ACGTCCGTGC TGATGACCCC GGACGGCCGC
ACTGTCGAGG CCGAGGCGGC GCACGGTACC GTCACCCGGC ACTACCGGCA GTACCAGAAG
GGCGAGAAGA CCTCGACCAA CCCGATCGCC TCGATCTACG CCTGGACCCG GGGCCTGGCC
CACCGGGGCA AGCTGGACGG CACCCCGGCG GTTACCGAGT TCGCCAACAC CCTGGAAAAG
GTCATCATCG AGACCGTCGA GGGCGGCCAG ATGACCAAGG ACCTCGCGCT ACTGATCTCG
CGGGACGCCC CGTGGCTGAC CACCGACGAG TTCATGAACG CGCTGGACGA GAACCTGGCC
CGTAAGCTCG CCTGA
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| Protein sequence | MAKIKVNNPV VELDGDEMTR IIWKQIREQL ILPYLDVDLR YYDLSIQHRD ETDDQATVDA
ANAIKEHGVG VKCATITPDE ARVEEFGLKK MWRSPNGTIR NILGGVVFRE PIIMSNVPRL
VPGWTKPIII GRHAHGDQYK ASDFVVPGPG KVTITYTPTD GTQPVEMEIA DFPGGGVAMG
MYNFDESIRD FARASMRYGL DRGYPVYLST KNTILKAYDG RFKDIFAEVY EAEFKADFEA
AGISYEHRLI DDMVAAALKW EGGFVWACKN YDGDVQSDTV AQGFGSLGLM TSVLMTPDGR
TVEAEAAHGT VTRHYRQYQK GEKTSTNPIA SIYAWTRGLA HRGKLDGTPA VTEFANTLEK
VIIETVEGGQ MTKDLALLIS RDAPWLTTDE FMNALDENLA RKLA
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