| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3768 |
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| Symbol | sdhA |
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| ID | 5060246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 4319278 |
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| End bp | 4321191 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640476026 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_001160577 |
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| Protein GI | 145596280 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0873813 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACTA CCACGCGAAT CGAACGACAC CACTACGACG TCGTCGTGAT CGGGGCCGGC
GGCGCCGGGC TGCGGGCGGC GATCGAGGCC CGGCTGGCCG GCAAGAAGAC CGCGATCATC
TCGAAGTCGC TCTTCGGCAA GGCACACACG GTGATGGCCG AGGGCGGCGC CGCCGCCGCG
ATGGGGAACG TGAACAGCCG GGACAGCTGG CAGGTGCACT TCCGCGACAC CATGCGCGGC
GGCAAGTTCC TGAACAACTT CCGCATGGCC GAGCTACACG CGAAGGAGTC GCCGCAGCGG
ATCTGGGAGC TGGAGACCTA CGGCGCCCTC TTCGACCGGA CGACAGACGG CAAGATCTCC
CAGCGCAACT TCGGCGGGCA CGAGTACCCG CGCCTCGCGC ACGTGGGCGA CCGAACCGGC
CTGGAGCTGA TCCGCACCCT CCAGCAGAAG ATCGTCTCCC TACAACAGGA AGATCAGCGC
GAGCACGGCT CCTACGACGC CCGAATCCGG GTCTTCGCCG AGACCACCAT CACCGAGCTG
CTACTCGACG GTGACCGGAT CGCCGGCGCC TTCGGCTACT ACCGGGAGTC GGGGGAGTTC
GTTCTCTTCG AGGCACCGGC AGTGGTGCTG GCGACTGGCG GGGTCGGCCG CTCGTACAAG
GTCACCTCGA ACTCCTGGGA GTACACCGGG GACGGCCACG CGCTGGCGCT GCGCGCCGGG
GCGACGCTGA TCAACATGGA GTTTCTCCAG TTCCACCCGA CCGGCATGGT CTGGCCTCCC
TCGGTGAAGG GCATCCTGGT CACCGAGTCG GTGCGCGGTG ATGGTGGGGT CCTGAAAAAC
TCCGAGGGCA AGCGATTCAT GTTCGACTAC GTGCCGGATG TGTTCCGGAA GCAGTACGCG
GACAGTGAGG CCGAGGCGGA CCGCTGGTAC GACGACCCGG ACAACAATCG GCGTCCACCG
GAGCTGCTTC CCCGCGACGA GGTGGCCCGG GCCATCAACA GCGAGGTCAA GGCGGGCCGG
GGCACTCCCG CGGGCGGCGT CTACCTGGAC ATCGCCTCCC GGCTGCCGGC GGAGGAGATT
CGTCGTCGCC TCCCGTCGAT GTATCACCAG TTCAAGGAGC TGGCCGATGT CGACATCACC
CGGGAGTCGA TGGAGGTCGG GCCGACCTGC CACTACGTGA TGGGTGGGGT GGAGGTCGAC
CCCGACTCCG GCGCCGCGTT CGGCCACGTC CGCGGGCTGT TCGCCGCCGG CGAGGTCTCC
GGCGGGATGC ACGGCTCCAA CCGGCTCGGC GGTAACTCCC TGTCGGACCT GCTGGTCTTC
GGCAAGCGGG CGGGCGGGCA CGCCGCCTCG TACGCCGACG GGTTGGCGTC CCGGCCCCGG
GTCCCGGTGC CGGCGGTCGA GACCGCGGTG GAGACGGCCC TGGCCCCGTT GCAGCGGGAC
ACCGGCGAGA GTCCGTACGT TCTGCAGCAG GATCTCCAGG CGGTGATGGG CGACCTGGTC
GGCATCATTC GGCGGGAGGG TGAGCTGGTT GACGCGCTGT CCCGGCTCGG GGAGCTTCGC
GAACGAGTGG CCAAGGTGAG CGCGGCGGGT GGCCGGCGCT ACAACCCGGG CTGGCACCTT
GCCCTTGATC TCCGCAACAT GCTGGTGGTC TCCGAGTGCA CCGCGAAGGC AGCACTGGAG
CGACGGGAGT CGCGGGGCGG CCACACCCGG GAGGACCATC CAACGATGGA CCCGGCCTGG
CGGCGGGTCA ACCAGGTCTG CTCCCTGGAG GACGACATCG TTCACCTGGA CCGCAAGCCG
CTACCGCGGA TGCGGCCGGA GCTTTTCGCG CTCTTCGACC GCGCGGAGTT GGCCAAGTAC
CTGACCGACG AGGAGCTGGC GGAGTTCGAC GCCCTCGCCA AGGAGGAGCG CTGA
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| Protein sequence | MTTTTRIERH HYDVVVIGAG GAGLRAAIEA RLAGKKTAII SKSLFGKAHT VMAEGGAAAA
MGNVNSRDSW QVHFRDTMRG GKFLNNFRMA ELHAKESPQR IWELETYGAL FDRTTDGKIS
QRNFGGHEYP RLAHVGDRTG LELIRTLQQK IVSLQQEDQR EHGSYDARIR VFAETTITEL
LLDGDRIAGA FGYYRESGEF VLFEAPAVVL ATGGVGRSYK VTSNSWEYTG DGHALALRAG
ATLINMEFLQ FHPTGMVWPP SVKGILVTES VRGDGGVLKN SEGKRFMFDY VPDVFRKQYA
DSEAEADRWY DDPDNNRRPP ELLPRDEVAR AINSEVKAGR GTPAGGVYLD IASRLPAEEI
RRRLPSMYHQ FKELADVDIT RESMEVGPTC HYVMGGVEVD PDSGAAFGHV RGLFAAGEVS
GGMHGSNRLG GNSLSDLLVF GKRAGGHAAS YADGLASRPR VPVPAVETAV ETALAPLQRD
TGESPYVLQQ DLQAVMGDLV GIIRREGELV DALSRLGELR ERVAKVSAAG GRRYNPGWHL
ALDLRNMLVV SECTAKAALE RRESRGGHTR EDHPTMDPAW RRVNQVCSLE DDIVHLDRKP
LPRMRPELFA LFDRAELAKY LTDEELAEFD ALAKEER
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