| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3763 |
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| Symbol | |
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| ID | 5060241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4312082 |
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| End bp | 4313026 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640476021 |
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| Product | LmbE family protein |
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| Protein accession | YP_001160572 |
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| Protein GI | 145596275 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
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| TIGRFAM ID | [TIGR03445] 1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.439198 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGACGACAC TGCCCGCTCG CCGGCTCCTG CTGGTCCACG CGCACCCCGA CGACGAAGCC
ATCGGCACCG GCGCGACGAT GGCCCACTAC GCGGCCACCG GTGCCCACGT CACGCTGGTC
ACCTGCACCT TGGGTGAGGA GGGTGAGGTG CACGTGCCGG AGCTGGCGCA GCTCGCCGCG
GCCGAAGCCG ACCAGCTCGG CGGCTACCGG ATCGGGGAGC TGGCGGCGGC CTGCCGCGCG
CTCGGGGTCA CCGACCACCG GTTCCTCGGT GGCGCCGGCC GCTATCGCGA CTCCGGGATG
ATGGGTCTGG CCACCAACGA GCACCCGCGC GCCTTCTGGC AGGCCGACCT CGATGTGGCC
GCCGGGCAGC TGGTGGAGGT CATGCGGGAG CTCCAACCCC AGGTCCTGAT CACCTATGAC
GGCAACGGGT TCTACGGCCA TCCCGATCAC ATCCAGGCCC ACCGGGTGGC GATGCGGGCA
CACGAGTTGG CCGCCGCCGA GGGGTTTGCT CCGGCGAAGG TCTACTGGAC GGCGATGCCG
CAAAGCGTGC TGGAGGCCGG GATGACCCAC TTCGCCGGCT CGTCGGACAA CCCGTTCGAG
GGCATCCAGG AGGCGGTGGA GTTACCGTTC TGCACGCCGG ATGAGCGCAT CGCCGCCCGG
ATTGACGCGA CCGGGCAGCA CGTCGCCAAG GAGGCGGCGA TGCGCGCACA CGCCACCCAG
ATTCCGGACA ACTCCTGGCT GTACTCGATC GCCGGCAACT TCGGCAGCGA GTTCATGGGG
GTGGAGTACT ACACCCTCGC GGTCGGGGAC AAGGGCCCCG GCTTCGGCCC GTACGGGTGG
GAGGACGACC TCTTCGCCGG GCTTCCGGTC GCCGAGGGTT CGGACCGGAC TCCGGTCGCC
GACGGCGCCG ACCGGGCCCC GGTCGGCGCG ACCGGTCAGC GGTGA
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| Protein sequence | MTTLPARRLL LVHAHPDDEA IGTGATMAHY AATGAHVTLV TCTLGEEGEV HVPELAQLAA
AEADQLGGYR IGELAAACRA LGVTDHRFLG GAGRYRDSGM MGLATNEHPR AFWQADLDVA
AGQLVEVMRE LQPQVLITYD GNGFYGHPDH IQAHRVAMRA HELAAAEGFA PAKVYWTAMP
QSVLEAGMTH FAGSSDNPFE GIQEAVELPF CTPDERIAAR IDATGQHVAK EAAMRAHATQ
IPDNSWLYSI AGNFGSEFMG VEYYTLAVGD KGPGFGPYGW EDDLFAGLPV AEGSDRTPVA
DGADRAPVGA TGQR
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