| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3754 |
|---|
| Symbol | |
|---|
| ID | 5060232 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 4302612 |
|---|
| End bp | 4306073 |
|---|
| Gene Length | 3462 bp |
|---|
| Protein Length | 1153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640476012 |
|---|
| Product | peptidase S8/S53 subtilisin kexin sedolisin |
|---|
| Protein accession | YP_001160563 |
|---|
| Protein GI | 145596266 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1404] Subtilisin-like serine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.338541 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACGTT ATCTGCCGGC TGCCGGAGCG TGCGCTGGGA ATGACATTCT GCCCTTCGTC
AATGCGACTC CCGTAGATGT GACCCTCGAC GAGGAGGCCC CGTTGCACCG GAGAAGAACA
ACGGCCGTCA TCGGCCTCGT GCTCACGCTG GCGTTGACCG CGCCGACCGC CGCTTCCGCC
GCGCCGACCG CCGCTTCCGC CGCCACGGCG GGAGCCCCGA AGGTCGAGCC CAACAGGCTA
CACACCGTTA CCTTGATCAC CGGGGACCGA GTCACGGTGA CCGCCGCCGG CAACACCGAG
GTGCGTCCCG GCCCGGACCG GAAGGACATG CGCTTCCTGA TCGACCACGA GCGCGGCGGC
CAGCTCTCCG TCGTGCCACA GGACGCGGTC GCGCTGATCC AGGCCGGTCG GGTCGACCGT
CGGCTCTTCG ACATCACCGG GTTGATCGAC GCCGGCTACG ACGATGCCCG TCGGGACACG
CTGCCGTTGC TCGTGTCGTA CTCGGGGGAA CCGGGCAGCC GTGGTGCGGG CGTGTCGGCC
GGCGTGCGGG TGACCCGCGA CCTGCCAGCG ATCAACGGTG CCGCGGTGAC CGCCGGCAAG
TCTGACGTCG CCGCGGTCTG GTCCGCCCTC AACGTGGGCG CGACCGACGT CCGGTTCGGC
GCGGAGGAGG GCGTCGAGCG GCTCTGGCTC GACGGCCGTC GCACGATCAC CCTTGACCAC
AGCGTCAGCC AGATCGGGGC TCCCACCGCC TGGTCGGCGG GCCTCACCGG AACGGGGGTG
ACCGTGGCGG TACTGGACAC CGGCGTCGAC GCCACCCACC CCGACCTGAT CGGCAAGATC
GCCGAGGCGC GCAACTTCAC CGAGACGCCC GATGCCCACG ACACCGTCGG GCACGGAACC
CACGTCGCCT CGACCATCGC CGGCAGCGGT GTCGCGTCCG ACGGTCGGTA CCAGGGTGTG
GCTCCCGACG CGACGCTGCT CGATGGCAAG GTCTGCCAGG ACGTCGGCTG TCCCGAGTCG
GCGATCCTGG CCGGCATGCA GTGGGCCGCG GTCGACAAGC GAGCTGATGT GGTGAACATG
AGTCTGGGCG GGTGGGACAG CCCAGAGATC GACCCGCTGG AGGAGGCGGT CGGAGCGTTG
ACCGCGCAGA CCGGCGCGCT CTTCGTGGTC TCGGCCGGCA ATGCCGGCGG AGACGGTACG
GTGGGCTCTC CGGCCAGCGC GGACGCTGCC CTGGCTGTCG GCGCCGTCGA CCGGGAGGAC
GAACTCGCCG ACTTCAGCAG TCGGGGGCCA CGCGCAGGTG ACGACGCGCT GAAGCCCGAC
ATCACCGCCC CCGGGGTCGA CATCGTTGCC GCTCGGTCGG CCCACGGTCG CATCGGTGAA
CCGGTAGGAG AGCACTACGC CCGGCTCTCC GGTACCTCAA TGGCCGCCCC GCACGTGGCC
GGTGCGGCGG CACTGCTCGC CCAACAGCAT CCGGACTGGA CGGCGGAGCA GCTCAAGTCG
ACTCTGATGG CGGCCGCCCG GCCGCATCCG GCGCAGACCG CGTACCAGCA GGGAGCCGGG
CGGGTCGACC TGACCCGGGC GATCGGGCAG ACGGTGACCA GCGATCCGGT GAGCGTCTCC
TTCGGCCTGG TTCGCTGGCC ACACGACGAC GACCAGCCGG TCACCCGTGC CGTCTCCTGG
CGCAACTCGG GATCCAGCCT GGTCGCGCTC GACCTCACGG TCGAGGCGGC CGGCCCTGGC
GGCCGGGCCG CGCCCGTCGG CATGTTCATC CTCGGCACGG ACCGGGTCAC CATCCCCGCC
GGCGGGCGGG CCGAGACCAC CGTCACCGTG GACACCCGGC TGGGTGACGT CGACGGCTAC
TGGACCGGTC GCGTGGTGGC CCGCTCCGGT GACATCGTGT CGGTCACCCC GTTGGCGGTG
AACCGTGAGG TGGAGAGCTA CGACCTCACC CTGACCCACC GAGATCGGGC GGGAGCGGCG
ACGGCGGAAT ACTGGACCAA CCTGGTCGGG CTGGATTCGC TCGGTCTTTG GTCCGCCTAC
GACGCCGACG GGACGGTGGA GGTGCGGCTT CCGAAGGGCC GGTACGGGCT GAAGTCGACG
ATCTTCGAGC CGGCCGGGGA GGGGCCTGTC GGCGTGACCG ATCTGGTTGC GCCGGAGTTG
GTGATCGACC GTGAACGAGA TATCACCGTG GACGCGCGGA CCGCGAAGCC GATCCGGGTA
ACCGTCCCCC GACGGGATGC GACCCCGGCG GTGGTCGGCA TCGGCTCGTC CTTCTACAGC
GCCGACGGCG ACTCCTACAA CCTCTTCCTG CGGGCGGACG ACTTCGACGA CATCACCATC
GGTCAGATCG GAAACGGCAG CTTCTCCGAC GAGATATTCA TCGCCACCAT CAGTAGTCAG
TGGGCCGACC TGGAGGCGGC ACACAGCCCC TACCTGTACG CGCTCAGTGA GACGATCCCC
GGACGGGCGC CCACCGGCTT CGTCCGGGAG TACCACAAGA GGGATCTCGC CACCGTGAAG
CACCGGTTCC ACGGTGGCTA CGAGGGGATG GCCGCGGAGC GGTACGTCCT GGCCACACTG
GAGCAGCCCA TTTTTGGAGC ATTCGTCAGG CTGCCCACCA CGGTGCCCGG CCAACGAGTC
GAGTACTACA ACACCAGGGG GGTCCGCTGG AGCGGCGTGA TCAATTTTGC TGCACCGGAC
CTGACGCTGG CGTGGCAGGA GCCGACGGCC TGGCTGGTGT CCGAGCCGAC AGCGTACCGG
GCCGGCCGGA CCACCCGGGA AACCTGGAAC CAGGCACCGC ACGGTCCCTC GTTCCCCGTG
CAGACGGTGA GCGACCCGGG GGACTTCATT CATGTGAGCC GGTTGGGCGA CACCATTCAC
GCCGGGATCC CGGTCTTCAG CGACGCCACC GGCCACCGCG GCAACTCTCT GGAAGAGACC
GAGCGGATGC GGCTGTGGCG CGACGGGAAG CTGGTCGGCG AGTCGGAGGT GGCACGTTTG
GGCGAGTTCC CGGTGCCGCC CGCGGAGGCG GACTACCGGC TTACCGTCGA GGCGACCCGC
GGCTTCACCG ACCTCAGCAC CGAGGTGGAG TCCACCTGGA CCTTCCGCTC GAAACACGAG
ACCGGTCCGG AGCCGGTCCG GCTACCGCTG TCGTCGATCC GGTTCAACCC GCCGTTGGCC
GCCGACAACA GTGCCCGCGC CGGTCGGCTG CTGCGGATCC CGGTCGAGAT GCGGCGACAG
TCCGGCGCGG GGACCGCGAC CGTCGCGAAG CTGACCGTAG ACGCCTCGTA CGACGGTGGG
AAGACGTGGC GGACGGTGCC CGTACGGCGT ACGGGTGACG GCTGGACCGC CCTGGTCCGG
CACCCCGACA CCCCGGGACA CGTGTCGCTG CGGGCTCACG CCCGGGACAC CGACGGCAAC
ACGGTGAGCA CGCGAATCCT GCAGGCGTAC CGCCTGAAGT GA
|
|---|
| Protein sequence | MERYLPAAGA CAGNDILPFV NATPVDVTLD EEAPLHRRRT TAVIGLVLTL ALTAPTAASA
APTAASAATA GAPKVEPNRL HTVTLITGDR VTVTAAGNTE VRPGPDRKDM RFLIDHERGG
QLSVVPQDAV ALIQAGRVDR RLFDITGLID AGYDDARRDT LPLLVSYSGE PGSRGAGVSA
GVRVTRDLPA INGAAVTAGK SDVAAVWSAL NVGATDVRFG AEEGVERLWL DGRRTITLDH
SVSQIGAPTA WSAGLTGTGV TVAVLDTGVD ATHPDLIGKI AEARNFTETP DAHDTVGHGT
HVASTIAGSG VASDGRYQGV APDATLLDGK VCQDVGCPES AILAGMQWAA VDKRADVVNM
SLGGWDSPEI DPLEEAVGAL TAQTGALFVV SAGNAGGDGT VGSPASADAA LAVGAVDRED
ELADFSSRGP RAGDDALKPD ITAPGVDIVA ARSAHGRIGE PVGEHYARLS GTSMAAPHVA
GAAALLAQQH PDWTAEQLKS TLMAAARPHP AQTAYQQGAG RVDLTRAIGQ TVTSDPVSVS
FGLVRWPHDD DQPVTRAVSW RNSGSSLVAL DLTVEAAGPG GRAAPVGMFI LGTDRVTIPA
GGRAETTVTV DTRLGDVDGY WTGRVVARSG DIVSVTPLAV NREVESYDLT LTHRDRAGAA
TAEYWTNLVG LDSLGLWSAY DADGTVEVRL PKGRYGLKST IFEPAGEGPV GVTDLVAPEL
VIDRERDITV DARTAKPIRV TVPRRDATPA VVGIGSSFYS ADGDSYNLFL RADDFDDITI
GQIGNGSFSD EIFIATISSQ WADLEAAHSP YLYALSETIP GRAPTGFVRE YHKRDLATVK
HRFHGGYEGM AAERYVLATL EQPIFGAFVR LPTTVPGQRV EYYNTRGVRW SGVINFAAPD
LTLAWQEPTA WLVSEPTAYR AGRTTRETWN QAPHGPSFPV QTVSDPGDFI HVSRLGDTIH
AGIPVFSDAT GHRGNSLEET ERMRLWRDGK LVGESEVARL GEFPVPPAEA DYRLTVEATR
GFTDLSTEVE STWTFRSKHE TGPEPVRLPL SSIRFNPPLA ADNSARAGRL LRIPVEMRRQ
SGAGTATVAK LTVDASYDGG KTWRTVPVRR TGDGWTALVR HPDTPGHVSL RAHARDTDGN
TVSTRILQAY RLK
|
|---|
| |