Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3751 |
Symbol | |
ID | 5060229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4299587 |
End bp | 4300438 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640476009 |
Product | hypothetical protein |
Protein accession | YP_001160560 |
Protein GI | 145596263 |
COG category | [R] General function prediction only |
COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
TIGRFAM ID | [TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1 [TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0136365 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.197215 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAGA GCAACGGGCG GGAAGCGGCC GGTGCGGCCC AGCGGGACCA GCACCGGGGT GCTGGGGCAC CACGTCGGTC AGTGATCGGC GGCAGCACCG CCGATCAGCG GCTGCTCGAC TCCCGTCAGC GCAGTGACTG GAAGACCCGG GACGCCTGGC GGGCGCTGCG GATCCTCTCC GAGTTTGTCG AGGGCTTCGA CACCCTCTCC GACCTACAGC CAGCGGTGAG CGTCTTCGGT TCGGCGCGAA GCCTGCCGGA CAGCCCGGAG TGCCGGATGG CCGAGGAACT GGGTGGAGCG CTGGCCCGGG CCGGCTACGC GGTCATCACC GGTGGGGGGC CGGGGGTGAT GCAGGCGGCC AACCGGGGGG CCAGCGAGGC CGGCGGGCTC TCCGTCGGCC TGGGCATCGA GCTCCCCTTC GAGCAGGGCA TCAACGACTG GGTCGACGTG GCGATCGATT TTCGGTACTT CTTCGCGCGG AAGACCATGT TCGTCAAGTA CGCCCAGGCG TTCGTGGTGC TTCCGGGCGG TTTCGGCACG ATGGACGAGC TGTTCGAGTC GCTCACCCTG GTGCAGACCG GCAAGGTGAC CCGGTTCCCG GTGGTGCTGA TGGGCTCCGA CTACTGGCGC GGCCTGCTCG ACTGGCTGCG GGACACGATG GCGGCCGAGG GTAAGATCGG GGCGATTGAT CTTGAGCTGA TCTGCCTCAC CGACGATGTG AAGACGGCGG TGCGGCACAT CGTCGAGACG GAGGCGGTGC TCTCCGCCGA GCAGGAGGCG GTTCGCGAGG AGTCCGTCGC CGTCGCCGCG GCCGAGCGAC AGGCCGCTGC CGACGAGGGG GGTCGGGGCT GA
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Protein sequence | MSESNGREAA GAAQRDQHRG AGAPRRSVIG GSTADQRLLD SRQRSDWKTR DAWRALRILS EFVEGFDTLS DLQPAVSVFG SARSLPDSPE CRMAEELGGA LARAGYAVIT GGGPGVMQAA NRGASEAGGL SVGLGIELPF EQGINDWVDV AIDFRYFFAR KTMFVKYAQA FVVLPGGFGT MDELFESLTL VQTGKVTRFP VVLMGSDYWR GLLDWLRDTM AAEGKIGAID LELICLTDDV KTAVRHIVET EAVLSAEQEA VREESVAVAA AERQAAADEG GRG
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