Gene Strop_3751 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3751 
Symbol 
ID5060229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4299587 
End bp4300438 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content70% 
IMG OID640476009 
Producthypothetical protein 
Protein accessionYP_001160560 
Protein GI145596263 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0136365 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.197215 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGA GCAACGGGCG GGAAGCGGCC GGTGCGGCCC AGCGGGACCA GCACCGGGGT 
GCTGGGGCAC CACGTCGGTC AGTGATCGGC GGCAGCACCG CCGATCAGCG GCTGCTCGAC
TCCCGTCAGC GCAGTGACTG GAAGACCCGG GACGCCTGGC GGGCGCTGCG GATCCTCTCC
GAGTTTGTCG AGGGCTTCGA CACCCTCTCC GACCTACAGC CAGCGGTGAG CGTCTTCGGT
TCGGCGCGAA GCCTGCCGGA CAGCCCGGAG TGCCGGATGG CCGAGGAACT GGGTGGAGCG
CTGGCCCGGG CCGGCTACGC GGTCATCACC GGTGGGGGGC CGGGGGTGAT GCAGGCGGCC
AACCGGGGGG CCAGCGAGGC CGGCGGGCTC TCCGTCGGCC TGGGCATCGA GCTCCCCTTC
GAGCAGGGCA TCAACGACTG GGTCGACGTG GCGATCGATT TTCGGTACTT CTTCGCGCGG
AAGACCATGT TCGTCAAGTA CGCCCAGGCG TTCGTGGTGC TTCCGGGCGG TTTCGGCACG
ATGGACGAGC TGTTCGAGTC GCTCACCCTG GTGCAGACCG GCAAGGTGAC CCGGTTCCCG
GTGGTGCTGA TGGGCTCCGA CTACTGGCGC GGCCTGCTCG ACTGGCTGCG GGACACGATG
GCGGCCGAGG GTAAGATCGG GGCGATTGAT CTTGAGCTGA TCTGCCTCAC CGACGATGTG
AAGACGGCGG TGCGGCACAT CGTCGAGACG GAGGCGGTGC TCTCCGCCGA GCAGGAGGCG
GTTCGCGAGG AGTCCGTCGC CGTCGCCGCG GCCGAGCGAC AGGCCGCTGC CGACGAGGGG
GGTCGGGGCT GA
 
Protein sequence
MSESNGREAA GAAQRDQHRG AGAPRRSVIG GSTADQRLLD SRQRSDWKTR DAWRALRILS 
EFVEGFDTLS DLQPAVSVFG SARSLPDSPE CRMAEELGGA LARAGYAVIT GGGPGVMQAA
NRGASEAGGL SVGLGIELPF EQGINDWVDV AIDFRYFFAR KTMFVKYAQA FVVLPGGFGT
MDELFESLTL VQTGKVTRFP VVLMGSDYWR GLLDWLRDTM AAEGKIGAID LELICLTDDV
KTAVRHIVET EAVLSAEQEA VREESVAVAA AERQAAADEG GRG