Gene Strop_3750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3750 
Symbol 
ID5060228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4299039 
End bp4299584 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content69% 
IMG OID640476008 
Producthypothetical protein 
Protein accessionYP_001160559 
Protein GI145596262 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.226065 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.110308 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCCA TCTGTGTCTT CTGTGCGTCT TCCCGCACGC TTGACCAGCG TTTCCTGGAC 
CTGGCCACCG AGACCGGCGC GGAGCTGGCC CGTCGTGGTC ACACGCTCGT CAGCGGTGGT
GGCCGGGTCG GGATGATGGG GGCGGTGGCG GCCGGCGTGC GGGCCGCCGG CGGGCGCACG
CTGGGCATCA TCCCGCAGTC CCTGGTCGAT CTGGAGGTCG CCGACCTCGC CTCCGACGAG
CTGCTGATCA CCGAGTCGAT GGCCGATCGT AAGACGATCA TGATCGACAA GTCGGATGCC
TTCCTCGCCC TGCCCGGCGG CCTCGGCACG CTGGACGAGC TCTTCGAGGT CTGGACGACC
GCCACGCTGA CGCTGCACAG CAAGCCGATG ACGCTGGTGG ACGCCGACGG CTTCTACCGC
CCGTTGCTCG ACTGGCTGGG TGACCTTGCC GGGCAGACCT TCCTGAAACC GGCGGGGCTG
GAGCTGCTCT CCGTCGTGGC GACCGTCCCC GCGGCCCTCG ACCTCCTGGA ATCCCGGTTG
AGCTGA
 
Protein sequence
MAAICVFCAS SRTLDQRFLD LATETGAELA RRGHTLVSGG GRVGMMGAVA AGVRAAGGRT 
LGIIPQSLVD LEVADLASDE LLITESMADR KTIMIDKSDA FLALPGGLGT LDELFEVWTT
ATLTLHSKPM TLVDADGFYR PLLDWLGDLA GQTFLKPAGL ELLSVVATVP AALDLLESRL
S