| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3746 |
|---|
| Symbol | |
|---|
| ID | 5060224 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 4289073 |
|---|
| End bp | 4290416 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640476004 |
|---|
| Product | peptidase M16 domain-containing protein |
|---|
| Protein accession | YP_001160555 |
|---|
| Protein GI | 145596258 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0612] Predicted Zn-dependent peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.537762 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGGCC CGATGACGAC CGTGTCGCGC GCCCTGCCGC CGCTCGGTCC GACCCGGAAA
CTAAGGCTGC CGAAGCAGGC CGAGCGGACG CTCAGCAACG GTCTCACCGT GATCGCGGTC
CGTCGGCCGG CGGTGCCCCT GGTCGAGCTG CGGCTCGGGA TGCCGTTCGG GCGGGTGCAT
CCGGCCCGGG CTGCGATGCT CGCACAGACC CTGCTCTCCG GTACGACCAC ACTGACCGGG
GTGCAGATCG CTGCGGAGTT GCAGAAGGTC GGCGGTGGGC TTTCCGCCGG GGTCGACCCA
GACCGGCTGA TGCTCTCCGG CGCGGGCCTG GTGACCGGCC TGGACCGGAT GTTGGAGATT
CTGGCCGAGG TGCTTGCCAC AGCGGCCTAT CCGGCCGACG AGGTCGCCAC CGAGCGGGAC
CGGCTGGTCG ATCGGATCCA GCTGGCCCAG TGCCAGCCCG GCCATCTGGC CCGCACCGCC
CTGCTCAGGC GGATCTACGG CCGGCACCCG TATGCGGTGC AGACACCGAC CCCGGATCAG
GTCCGCGCGG TGCGGCCGAC CGTGCTGCGG AAGCTGCATG ACCAGCGGGT GCATCCGACG
GGTGCCGTCC TGGTGCTGGT CGGGGACATC CAGCCGGAGC GGGCGTTGGA CGCGGCCGAG
CAGGCGCTCG GCGGGTGGAA CGGTACCGGG CACGTCGCCG AGCTACCGGC CACGCCACCG
TTGGAGCCGG GGCCGCTGCT CCTCGTTGAC CGCCCCGGAT CAGTGCAGTC GTCGCTGCGG
ATGGCGCTGC CGGCGGTGCC GCGCACCGAC CCCGACCACG CCGCCCTGCA ACTCGCGAAC
CTGATCTTTG GTGGCTACTT CTCGTCTCGC TGGGTGGAGA ACATTCGCGA GGAGAAGGGC
TACACGTACG GACCGCACTC GTTGGTCGAG CACTCGGCCG CCGGGTCGGT CCTGCTCGCC
GCCGCCGAGG TGGCCACCGA CGTGACCGGG GCGGCACTGC TGGAGACCCA GTACGAGTTG
GGTCGACTGG CCTGCGTCGC ACCGGGGGAG GAGGAGCTGG AGCAGGCCCG CCAGTACGCT
CTCGGGACGC TCCAACTCGG CATCTCCACC CAGGCCGGGC TGGCGGCGCT GACCAGTGCG
TACGCGGGTA GCGGCCTGCG TCTGGACTTT TTGGCCGAGC ACGCGGCTCG GCTGGCGAAG
GCGACGGTGG CTGATGTCGC CGACGCGGCG GCCCAGTACC TCGCGCCGGC CCGGGCGGTC
ACCGTTGTGC TGGGGGACGC GCAGCGGGTT GCCGGGCAGT TGGCGACTCT CACCGAGGTT
GTGACCGAAC CGGCGGGGCC GTGA
|
|---|
| Protein sequence | MSGPMTTVSR ALPPLGPTRK LRLPKQAERT LSNGLTVIAV RRPAVPLVEL RLGMPFGRVH
PARAAMLAQT LLSGTTTLTG VQIAAELQKV GGGLSAGVDP DRLMLSGAGL VTGLDRMLEI
LAEVLATAAY PADEVATERD RLVDRIQLAQ CQPGHLARTA LLRRIYGRHP YAVQTPTPDQ
VRAVRPTVLR KLHDQRVHPT GAVLVLVGDI QPERALDAAE QALGGWNGTG HVAELPATPP
LEPGPLLLVD RPGSVQSSLR MALPAVPRTD PDHAALQLAN LIFGGYFSSR WVENIREEKG
YTYGPHSLVE HSAAGSVLLA AAEVATDVTG AALLETQYEL GRLACVAPGE EELEQARQYA
LGTLQLGIST QAGLAALTSA YAGSGLRLDF LAEHAARLAK ATVADVADAA AQYLAPARAV
TVVLGDAQRV AGQLATLTEV VTEPAGP
|
|---|
| |