Gene Strop_3722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3722 
Symbol 
ID5060198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4265116 
End bp4266318 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content73% 
IMG OID640475978 
Productglycosyl transferase, group 1 
Protein accessionYP_001160531 
Protein GI145596234 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTCG GTCTCGTCTC TGCGCACGCC GACCCGTCCC GGCGTGCTGG CGGCCTGCCT 
GTCGGGACCC ACCAGCACAT CGCCCGGGTC GCTGCTGAAC TCGCTGGGCG GGGCCACGAT
GTCCGGCTTT ACGAGCGCCG TGACGCCCCG GAGCAGGCAG CGACGGCGAC GGTGGATGGC
TACCTGGTCG AACGGGTCCC GGTCGGTCCC GCCGCGGCGG TGCCCACCGC CGAACTGGTT
GGCTGCGTCG CCGACTACGG CCGTTGGCTG ACCGACCGGT GGACGGACGA CTGGGCGCCG
GAGCTAGTGC ACGGGCACTA CTGGCTCGGT GGTCTCGCCG CCGCGCACGC CGTGCGCGAG
ACCGACATTC CGATCGTGCA GACGTTCCAC TCGCTCGGGC TGGAACAGCT GCGCCGCCTC
GGCGCGCGCT ACAGCGCGCC GCCGGAGCGA ATCCCGCTGG AGCGGGCACT CATTCGCGCG
GTGGACATCG CCGTGGCGCA GTCCAACGAC GAGGTGGACG AGCTGGCCCG GATGGGTCTG
CAACGTGCCT CGGTGGCGCT GGTCTCACCG GGGGTGGACG CTGAGCTGTT CCACCCCGAC
GGCGAGGCGG CGCCGCGCGA GGAACGACCG CGGATCCTCT CCGTGACCAC CCTCGACCCC
GGCCATGGCC AGGAGGATCT GATCCGCGTG ATCCGGATGG TTGGTGACGC GGAACTGGTC
ATCGTCGGTG GCCCGCCGGG CGAGCGGCTC GCCGAGCACG CCGAGGCACG TCAGCTCCGG
GAACTGGCCG AACGCAACGG GGTGGCCGAT CAGGTGACGC TGGTGGGGGC GGTGCCGCAC
GAGCAGCTGG CCACCTGGTA CCGCTCGGCG GACGTGGTGG CGTGTACGTC GGGCTACGCG
TCGGCCGGCC GGGTGTCGTT GGAGGCGATG GCCTGCGGCG TTCCGGTCGT CGGGTACGCG
ATGGGTGGGA TCGCCGATGC GGTCGTGGAC GAGGTCACCG GACGGCTGGT GCCGCCGGGC
GACGTCCGCG CCCTGGGGGT GATGCTGCGT CGGCTGATGA CCGACAACGC CGGCCGGTTC
GCGTACGGGC ACGCTGCCGT GGACCGGGTG CGGTGCAGCT ACACGTGGGA GCGGACCGGC
GCTGCCCTGG AGCGGCTCTA CGAGCGGGTC GTCCGCTGCC GTGCCCCGGT TGAGGCCGCC
TGA
 
Protein sequence
MRVGLVSAHA DPSRRAGGLP VGTHQHIARV AAELAGRGHD VRLYERRDAP EQAATATVDG 
YLVERVPVGP AAAVPTAELV GCVADYGRWL TDRWTDDWAP ELVHGHYWLG GLAAAHAVRE
TDIPIVQTFH SLGLEQLRRL GARYSAPPER IPLERALIRA VDIAVAQSND EVDELARMGL
QRASVALVSP GVDAELFHPD GEAAPREERP RILSVTTLDP GHGQEDLIRV IRMVGDAELV
IVGGPPGERL AEHAEARQLR ELAERNGVAD QVTLVGAVPH EQLATWYRSA DVVACTSGYA
SAGRVSLEAM ACGVPVVGYA MGGIADAVVD EVTGRLVPPG DVRALGVMLR RLMTDNAGRF
AYGHAAVDRV RCSYTWERTG AALERLYERV VRCRAPVEAA