Gene Strop_3706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3706 
Symbol 
ID5060182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4249476 
End bp4251026 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content71% 
IMG OID640475962 
Producthistidine kinase, dimerisation/phosphoacceptor 
Protein accessionYP_001160515 
Protein GI145596218 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGGCGT GGCAGGCTGG GCGGGTGTCA ACGCTGCGCG ACCTCGCCGA CGAGCACACC 
CAGCTACGCC CTGCTGACAT CGACCATCTA CATCGGATCG CGGGCGACTG GCAGTTGCTC
TCCGATATGT CCTTTGCCGA CCTGTTGCTC TGGGTGCCGG TGGGCGAGGA CGGGACGTTC
CTCTGCGTGG CCCAGGTTCG ACCGACCACC GCGCCCACCG CGTACCAGGA TGATCAGGTA
GGTCGACTCA CCGGTGGTCC GGAGGTGGAC CACCTGGAGG TCGCCTATCG GCGGGGCCGG
ATCTGGCGGG AGGGCGATCC GGTCTGGTAC GGGGACGTGC CCGCGCGGCA CGAGGCGATC
CCGGTTCGGC TGCGGGCCGC CGACGGTGAG CAGGCCGAGG TGATCGCCGT GGTCGGCCGG
GACACCAACC TGTCGACCGC CCGGACTCCC AGTCAACTGG AGCTGAACTA CCTGACCACG
GCGGACGACC TGGCGCAGAT GCTCGCCGAC GGCACCTTCC CGCCGCCCCG GCTTCCCGGG
GAGACCACCT CGGCTCCCCG GGTCGGCGAC GGGCTGGTCC GGCTGGATGC GGGCGGCAGG
GTGACGTATG CGAGCCCGAA CGCGCAGTCG GCGTACCGGC GGGTTGGTTA CGCCTCGGAC
CTGGTGGGGG AGGACCTCAC GGCGCTGCAC CGGCGCCTCG CCGACGACCC ACTGGAGGGG
ACCGACGCGG CCAATGCGGC GCTCGCCGCG CTTCGGGGTG AGGCGCCGCC GCGCCGTGAG
ATCAACGCGC GTGGGGCGAC CATGCTGACC CGGGCGTTAC CGCTGATCCC CGCCGGAGTA
CCGATCGGCG CGTTGGTGCT GGTCCGTGAT GTCACCGAGG TCCGGCGCCG GGACCGGGCG
TTGATGACCA AGGACGCCAC CATTCGGGAG ATCCATCACC GGGTGAAGAA CAACCTCCAG
ACCGTCGCCG CCCTGTTGCG GCTGCAGGCC CGCCGGGTAG CCATGCCGGA GGCGCGGATC
GCGCTGGAGG AGTCGGTCCG CCGGGTCGCC TCGATCGCGC TGGTACACGA GACGCTCTCC
ATGTCCAACG ACGAGGTGGT CGAGTTCGAC GGGATCGTGG ACCGGGTGGC GAGCGCGGCG
ACCGAGGTGG CGGCCACCGA GTCGACCGTC CGGATGCGCC GTCAGGGCAG CTTCGGTGTG
CTCCCCGCCG AGCTCGCCAC GTCGCTGGTG ATGGTCCTCA ACGAGCTCCT GCTGAACGCC
GTCGAGCACG GGTTCCCCGC CGATGAAGAG GCTGGTGAGC AGCCGGGAGC CGCCGGTTCC
TCCCCCGAGG TGGTGGTTTC GGCCCACCGC TTTCGCAAGA TCCTGCATGT GTCGGTGGCC
GACAACGGTG GTGGACTGCC GCCGGGTTTC GACGCTGAAC GCGGCGGCAG TCTCGGCTTG
CAGATCGTCC GCGCGCTGGT CACCGGGGAG CTGCGCGGCA CGATCGAGCT GCGGACGAGC
GCCAGCGGAG GAACCGAGGC GCTGCTCGTC CTTCCACTCG ACCGGCTGTG A
 
Protein sequence
MLAWQAGRVS TLRDLADEHT QLRPADIDHL HRIAGDWQLL SDMSFADLLL WVPVGEDGTF 
LCVAQVRPTT APTAYQDDQV GRLTGGPEVD HLEVAYRRGR IWREGDPVWY GDVPARHEAI
PVRLRAADGE QAEVIAVVGR DTNLSTARTP SQLELNYLTT ADDLAQMLAD GTFPPPRLPG
ETTSAPRVGD GLVRLDAGGR VTYASPNAQS AYRRVGYASD LVGEDLTALH RRLADDPLEG
TDAANAALAA LRGEAPPRRE INARGATMLT RALPLIPAGV PIGALVLVRD VTEVRRRDRA
LMTKDATIRE IHHRVKNNLQ TVAALLRLQA RRVAMPEARI ALEESVRRVA SIALVHETLS
MSNDEVVEFD GIVDRVASAA TEVAATESTV RMRRQGSFGV LPAELATSLV MVLNELLLNA
VEHGFPADEE AGEQPGAAGS SPEVVVSAHR FRKILHVSVA DNGGGLPPGF DAERGGSLGL
QIVRALVTGE LRGTIELRTS ASGGTEALLV LPLDRL