Gene Strop_3694 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3694 
Symbol 
ID5060170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4238218 
End bp4239234 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content72% 
IMG OID640475950 
Productalcohol dehydrogenase 
Protein accessionYP_001160503 
Protein GI145596206 
COG category[R] General function prediction only 
COG ID[COG1064] Zn-dependent alcohol dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.250797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGCCTG GAACACGGCA ACGGGCCTTC TGGTCATCCG CCTGTGTTGT TACCGTGCCG 
ATCATGCGTG CTGCCTTCGC CTCCAGCTTC GACGACGCCA ACCCGCTCGC CGCGCTCACC
GTCGGCGAGC GGCCTGAACC CGCGCACCAC GGCGACGACT GGGTGACCAT CCAGGTCACC
GCCAGTTCGC TCAATCACCA CGATCTCTGG TCGCTGCGCG GCGTCGGACT GCGCGCGGAG
CAGCTGCCGA TGATCCTGGG CTGCGACGCG ACCGGCGTTG ACCCGGACGG CACCCCGGTG
GTCGTCTACC CGGTGATCCC CACCCCGAGC GATCCACGCG GGATCTCGAT TCTCTCCGAG
CACTTCCCGG GCACGCTGGC CGAACGGGTC GCCGTACCCC GGGCGAACCT GCTGCCACTG
CCGACGGGCC TGGCGGCGAC GGATGCGGCC TGCCTGCCCA CCGCCTGGCT GACCGCGTGG
CGGATGCTCA CCACCCGGGG CCGGGTGGAC GAGGCCGCCG CCGTGCTGGT GCAGGGGGCG
GGTGGAGGCG TGGCCACCGC GGCCGTCGCG CTCGCCGCCG CGATGGGTAA GCGGGTCTAT
GCGACCAGCC GGGACGCCGC CAAGCGGGAG CGGGTCGCGG CGCTCGGCGC GACCGCTGTC
GAACCGGGTG CCCGGCTGCC GGAGCGGGTG GACCTGGTGA TCGAGACGGT CGGTGCCGCG
ACCTTCGATC ACTCGCTGAA GTCAGCCGCG CCCATGGCCC GGATCGTGGT CTCTGGCGCT
ACCGCCGGGT ACGAACCGAA AGTCAACCTG CGCCGTGTCT TCGCCATGCA GTTGGAGATC
CTCGGCACCT CCATGGGCAC CCCAGACGAG CTGGCCGCGC TGCTGGCCTT CTGCGCCGAG
CGGGGGCTGC GCCCGGTGGT GGACCGTGTG GTGCCGTTCA CCACGGTCGA GGAGGCATTC
GCCCGCCTGC ACTCCGGCGA CGTCTTCGGC AAGGTGGTCG TCGACCACGC GGCCTGA
 
Protein sequence
MSPGTRQRAF WSSACVVTVP IMRAAFASSF DDANPLAALT VGERPEPAHH GDDWVTIQVT 
ASSLNHHDLW SLRGVGLRAE QLPMILGCDA TGVDPDGTPV VVYPVIPTPS DPRGISILSE
HFPGTLAERV AVPRANLLPL PTGLAATDAA CLPTAWLTAW RMLTTRGRVD EAAAVLVQGA
GGGVATAAVA LAAAMGKRVY ATSRDAAKRE RVAALGATAV EPGARLPERV DLVIETVGAA
TFDHSLKSAA PMARIVVSGA TAGYEPKVNL RRVFAMQLEI LGTSMGTPDE LAALLAFCAE
RGLRPVVDRV VPFTTVEEAF ARLHSGDVFG KVVVDHAA