| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3690 |
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| Symbol | kgd |
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| ID | 5060166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 4230757 |
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| End bp | 4234569 |
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| Gene Length | 3813 bp |
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| Protein Length | 1270 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640475946 |
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| Product | alpha-ketoglutarate decarboxylase |
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| Protein accession | YP_001160499 |
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| Protein GI | 145596202 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.222337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTGTCCGG GAGCTCCCGG CGTTCGGCGT AACCCACAAA CTCGCGTGAA AGAGGCGATA
CTGGCCGTGT CGACCCAGCA GACCTCGCAG GAGAACCCAC TGGCGGGTTT CGGCCCGAAC
GAGTGGATCG TCGAAGAGAT GTACCAGCGG TACCTCACCG ACCCCACCAG CGTCGACCCG
GCCTGGCACG ACTTCTTCGC CGACTACCGC CCCACACCGG ACACGGGAGG CACGGGGGAT
GGCGAGCCGG CCGCGAAGCC GGAGCCCGAC GGTCGGCCGG AACCCTCCAC CGCCAAGCCC
GCCTCCACCC CGGAGCGCAA GTCCGTGTCG ACCAAGGCCA CCCCCAGCAA GCCCGCCACC
AAGCCGGCTG CCGCCAAGCC GGCTACCGCG AAGCCGGCTG CCGCCAAGCC CACCACCAAG
CCGGCTGCCA CCAAGCCGGC CGCCACGCCG ACCTCGTCCG GCCCGCAGAC CGCGCCGCTA
CGCGGGGTCG CTGCGAAGAT CGTCCAGAAC ATGGACGCCT CGTTGAGCGT GCCGACCGCG
ACCAGCGTGC GCGCCGTCCC GGCCAAACTG CTGGTGGACA ACCGCATCGT GATCAACAAC
CACCTCGCCC GGGGCCGCGG CGGGAAGGTC AGCTTCACCC ACCTGGTCGG GTACGCACTG
GTCCGCGCGC TGGCGATGCA CCCGGAGATG AACAACTCCT TCGCCACCGT GGACGGCAAA
CCCACGCTGG TCCGCCCCGA ACACGTCAAC CTCGGAATCG CGATCGACCT GGTCAAGCCG
GACGGCAGCC GCAACCTGGT GGTGCCCTCC ATCAAGGCCT GCGAGCAGCT GGACTTCCGA
CAGTTCTGGC AGGCGTACGA AGACGTGGTC CGGCGGGCTC GGAAGAACGA GCTGACCATG
GAGGACTACG GCGGCACCAC CATCTCGCTG ACCAACCCCG GCGGCATCGG CACGGTGCAC
TCGATGCCAC GACTCATGAC CGGCCAGAGC GCGATCATCG GCGTCGGCGC GATGGAGTAC
CCGGCGCCGT ACCAGGGCAT GAGCGAAGGC ACCCTCGCCG AACTGGCGGT CAGCAAGGTC
ATCACGCTGA CCAGTACCTA CGACCACCGG ATCATCCAGG GTGCGCAGTC CGGCGAGTTC
CTCAAGGTGA TGCATGAGGT ACTCCTCGGC GAACACGGCT TCTACGACGA GATCTTCACC
TCGCTCCGCA TCCCGTACGA GCCGGTGCGG TGGATGCGGG ACGTCGCGAT CGACGGCGAG
GGTCAGATCA ACAAGACCGC CCGGGTCCAT GAACTGATCC ACGCCTACCG GGTGCGTGGC
CACCTGATGG CCGACACCGA CCCGCTCGAG TTCAAGATCC GCAAGCACCC GGATCTGGAC
GTCCTCCAAC ACGGGCTCAC CCTGTGGGAT CTGGACCGCC ATTTCCCGGT GAACGGTTTC
GCCAATCGGC AGCGGATGAA GTTGCGCGAT GTCCTCGGCG TGCTCCGCGA CACGTACTGC
CGCCGGGTCG GCATCGAGTA CATGCACGTC CAGGACCCGG AGGAGCGGCG CTGGATCCAG
CAACGGGTCG AGCGCAAGTA CGAGAAGCCG GCGGTCAACG AGCAGAAGCA CGTCCTCAAC
CGGCTGAATG CCGCGGAGGC ATTCGAGACC TTCCTCCAGA CCAAGTACGT CGGCCAGAAG
CGCTTCTCGT TGGAGGGGGG CGAGTCACTG ATCCCGCTGC TCGGCGAGGT GTTGGAGGCC
TCTGCCGAAG GTGGGCTGGA CGAGGTCGTC ATCGGCATGG CGCACCGGGG CCGGCTGAAC
GTGTTGGCCA ACATCGTCGG CAAGCCGTAC GAGAAGATCT TCTCCGAGTT CGAGGGGCAC
CTGGACCCGC GCTCCACGCA GGGCTCCGGC GACGTGAAGT ACCACCTCGG GCAGAACGGC
AAGTTCACCA CCCCGGACGG CGAGCACTCG GTCAAGGTCT CGGTGGTGGC GAACCCGTCG
CATCTGGAGG CCGTTGACCC GGTGCTGGAG GGCATCGTCC GGGCCAAGCA GGATCGGATT
GACCTCAAGC TGGAGGGCTA CACCGTGCTG CCGCTGGCGG TGCACGGGGA CGCGGCCTTC
GCCGGCCAGG GAGTCGTCGC CGAGACGCTC AACCTGTCCC AGCTCCGCGG CTACCGCACG
GGCGGCACGG TGCACGTGGT GGTCAACAAC CAGGTCGGCT TCACCACCCC ACCGGAGTAC
AGCCGCTCCA GCCTCTACAG CACCGATGTG GCCCGGATGA TCCAGGCCCC GATCTTCCAC
GTCAACGGCG ACGACCCGGA GGCCGTGGTG CGGGTCGCCC AGCTGGCCTT CGAGTACCGG
CAGACATTCA ACAAGGATGT CGTCATCGAC CTGGTCTGCT ACCGGCGACG CGGGCACAAC
GAGGGCGACG ACCCGTCGAT GTCGAACCCG GAGATGTACC GGATCATCGA CTCGAAGCGA
TCGGTTCGCA AGCTCTACAC CGAGGAGCTG ATCGGGCGGG GCGACATCAC CGTGGAGGAT
GCGGAGGAGC TGCTGCGCGA CTACCAGGCG CAGCTGGAGC GGGTGTTCAA GGCCACCCGA
GACGCCGCCA CCGCACCCCG TCAGCTCAGC CGCCCGAAGC GGGAGGACGA GCCGGAGCCA
CCGGTGGAGA CCGCCACTGA CGCCGATGTC ATCCGGGCGG TCGGCGAGGC GCATCTCCAC
CTGCCGGAGG GCTTCACCCC GCACAAGCGG ATCCAGCAGC TGCTCGACCG GCGGGCCAAG
ATGGCCAGCG AGGGCAACAT CGACTGGGGT TTCGGCGAGA TCATCGCGTT CGGCGCGCTG
CTGCACGACG GGGTCACCGT CCGGCTCGCC GGTCAGGACT CGCGCCGCGG CACGTTCGTG
CAGCGGCACG CCTCCGTCGT TGACGCCGAG ACCGGCGAGG ACTACCTGCC CCTGGAGTCA
CTCACCGCAG GCGGTGAGCG GTCGCGGTTC TTCGTGCACG ACTCGCTCCT GTCCGAGTAC
GCGGCGATGG GCTTCGAATA CGGCTACTCG GTAGAGAACG TCAACGCACT GGTCTGCTGG
GAGGCCCAGT TCGGCGACTT CGTCAACGGT GCCCAGTCGG TGATCGACGA ATTCATCTCC
TCCGGTGAGG TGAAGTGGGG TCAGCGCTCC GCGGTCACGC TGCTGCTGCC GCACGGCCAC
GAGGGCCAGG GCCCGGACCA CACCTCCGGC CGCCCGGAAC GGTTCCTCCA GCTCTGCGCC
GAGGACAACA TGCGGGTGGC CATCCCGACG ACGCCGGCGA ACTACTTCCA CCTGCTGCGT
CGCCAGGCCC TGTCACCGAA GCGCAAGCCC CTCGTCGTCT TCACGCCGAA GTCCCTGCTG
CGGCACCGAC TCTGCGTCTC GCAGGTCGAG GACTTCACCA ACGGTTCCTT CCAGCCGGTG
CTGCTCGACG GTGACGCCCC CGCGCCGGAG CAGGTGAAGC GGGTGCTGCT CTGCTCGGGC
AAGGTCTACT ACGACCTGTT CCAGGCTCGG CAGGATCGCG GTGTCACCGA TACCGCGATC
ATCCGGGTCG AGCAGCTCTA CCCGATGCCG ATCGACGAGA TCCGGGCCGC GCTCGCGAGG
TACCCGAACG CGGTGGACTT CGCCTGGACC CAGGAGGAGC CGGCCAACCA GGGTGCCTGG
TCGTTTGTCG CGCTCAACAT GCTGGAGCAC CTGGACGGGG TCCGGCTGCG CCGCATCTCC
CGTCCAGCGG CAGCCGCCCC GGCGGTCGGC TCGGCCAAGA TGCACGACGT CGAGCTCTCC
GCCCTTCTCG ACGCTGCACT CCCCCGCCCG TAG
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| Protein sequence | MCPGAPGVRR NPQTRVKEAI LAVSTQQTSQ ENPLAGFGPN EWIVEEMYQR YLTDPTSVDP
AWHDFFADYR PTPDTGGTGD GEPAAKPEPD GRPEPSTAKP ASTPERKSVS TKATPSKPAT
KPAAAKPATA KPAAAKPTTK PAATKPAATP TSSGPQTAPL RGVAAKIVQN MDASLSVPTA
TSVRAVPAKL LVDNRIVINN HLARGRGGKV SFTHLVGYAL VRALAMHPEM NNSFATVDGK
PTLVRPEHVN LGIAIDLVKP DGSRNLVVPS IKACEQLDFR QFWQAYEDVV RRARKNELTM
EDYGGTTISL TNPGGIGTVH SMPRLMTGQS AIIGVGAMEY PAPYQGMSEG TLAELAVSKV
ITLTSTYDHR IIQGAQSGEF LKVMHEVLLG EHGFYDEIFT SLRIPYEPVR WMRDVAIDGE
GQINKTARVH ELIHAYRVRG HLMADTDPLE FKIRKHPDLD VLQHGLTLWD LDRHFPVNGF
ANRQRMKLRD VLGVLRDTYC RRVGIEYMHV QDPEERRWIQ QRVERKYEKP AVNEQKHVLN
RLNAAEAFET FLQTKYVGQK RFSLEGGESL IPLLGEVLEA SAEGGLDEVV IGMAHRGRLN
VLANIVGKPY EKIFSEFEGH LDPRSTQGSG DVKYHLGQNG KFTTPDGEHS VKVSVVANPS
HLEAVDPVLE GIVRAKQDRI DLKLEGYTVL PLAVHGDAAF AGQGVVAETL NLSQLRGYRT
GGTVHVVVNN QVGFTTPPEY SRSSLYSTDV ARMIQAPIFH VNGDDPEAVV RVAQLAFEYR
QTFNKDVVID LVCYRRRGHN EGDDPSMSNP EMYRIIDSKR SVRKLYTEEL IGRGDITVED
AEELLRDYQA QLERVFKATR DAATAPRQLS RPKREDEPEP PVETATDADV IRAVGEAHLH
LPEGFTPHKR IQQLLDRRAK MASEGNIDWG FGEIIAFGAL LHDGVTVRLA GQDSRRGTFV
QRHASVVDAE TGEDYLPLES LTAGGERSRF FVHDSLLSEY AAMGFEYGYS VENVNALVCW
EAQFGDFVNG AQSVIDEFIS SGEVKWGQRS AVTLLLPHGH EGQGPDHTSG RPERFLQLCA
EDNMRVAIPT TPANYFHLLR RQALSPKRKP LVVFTPKSLL RHRLCVSQVE DFTNGSFQPV
LLDGDAPAPE QVKRVLLCSG KVYYDLFQAR QDRGVTDTAI IRVEQLYPMP IDEIRAALAR
YPNAVDFAWT QEEPANQGAW SFVALNMLEH LDGVRLRRIS RPAAAAPAVG SAKMHDVELS
ALLDAALPRP
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