Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3670 |
Symbol | |
ID | 5060146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4209661 |
End bp | 4210581 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640475926 |
Product | oxidoreductase domain-containing protein |
Protein accession | YP_001160479 |
Protein GI | 145596182 |
COG category | [R] General function prediction only |
COG ID | [COG0673] Predicted dehydrogenases and related proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.998821 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCGGTTCG GGTTGTTCGG TACCGGGCAC TGGGCGGGCG GGACGCACGG AGCGGGTCTG GCTGCCCATC CCCGTACCGA CTTGGTCGGT GTCTGGGGGC GGGATCCGGC CAAGGCCGCC GCGCTCGCCG AGCAGTACGG CGTGCCGGCG TTCGACGACG CCGACGCCCT CATCGAGGCG TGCGACGCCG TGGCGATCGC GCTGCCGCCG GATGTGCAGG TCGAGCTGGC GACCCGGGCC GCCGAGGCGG GACGGCACCT GCTGCTCGAC AAGCCGCTCG CACTGACCCT CGACGACGCC GACCGGCTGG TCGCCACGGC GGGGGCCGCC GGCGTTGCCT CGCTGGTCTT CTTCACCCAG CGCTATCACC AGAACGTCAC CAACTTCCTC ACCGCCACCG CCGCGGACGG CGGCTGGCAA CACGCCGAGG CGACCCTCTT CACCTCGATC TTCCAGCCCG GCAGCCCGTA CGCGGGCTCT ACCTGGCGGC GTGAGCACGG TGGGCTCTGG GACATTGGTC CGCACGCGCT GTCACTGATC CTGCCGGTCA TGGGTCGGGT CACCCGGGTC GCGGCGATGG ACGGCCCCCG GGGTCTGGTG CACCTGCTGC TCAACCACGA CAACGGCGCA ACGAGCAGAC TGTCGCTCAC CCTGGACGCG CCCAGCGGAG CGGTTCGCCG GGACATCGTC TTCTACGGCG AGAGCGGCAT CGAGACTGTT CCCTACGGTA ACGACACGCT GGCCGGGGCG TTCGGGACGG CGATCGACCA GCTCCTGGCG GAGATCGACT CGGGAACCCG GGATCACCGC CTCGACGTCC GGTTCGGTCG TGAGGTGGTG GCCATCCTGG CGGCGGCCGA GACGGCCCGC GCCGAGTCCC GCACCGTTGA GGTTCCCGTG CAACCATCCA GCACGTCCTG A
|
Protein sequence | MRFGLFGTGH WAGGTHGAGL AAHPRTDLVG VWGRDPAKAA ALAEQYGVPA FDDADALIEA CDAVAIALPP DVQVELATRA AEAGRHLLLD KPLALTLDDA DRLVATAGAA GVASLVFFTQ RYHQNVTNFL TATAADGGWQ HAEATLFTSI FQPGSPYAGS TWRREHGGLW DIGPHALSLI LPVMGRVTRV AAMDGPRGLV HLLLNHDNGA TSRLSLTLDA PSGAVRRDIV FYGESGIETV PYGNDTLAGA FGTAIDQLLA EIDSGTRDHR LDVRFGREVV AILAAAETAR AESRTVEVPV QPSSTS
|
| |