| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3669 |
|---|
| Symbol | |
|---|
| ID | 5060145 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 4208569 |
|---|
| End bp | 4209366 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640475925 |
|---|
| Product | rRNA (adenine-N(6)-)-methyltransferase |
|---|
| Protein accession | YP_001160478 |
|---|
| Protein GI | 145596181 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGCCCC GCCGTACCCG AGTAACCGAA CGCGACCGGT CCCGTCGCGT ACTCTCTCAG
AACTTTCTCG TTGATCCGGC CGCGGTCAAC CGGCTGACCC GGGCGGCCCA GCCCGACCCG
GACCGCCTCC TGCTGGAGGT GGGTGCCGGG CGTGGCCAGT TGACCCGGCT GCTCGCCGCC
CGCAGCCGTC ACCTCATCGC CTACGAGGTA GACCCGGTCA ACGCTGCCGA ACTGGCCCGG
AGCTGCGCGG GTCTGCCCAC CGTGACCTGT CGGCAGGCCG ACTTCCTGAC CGCCTCGCCG
CCGCGGGCGC CGTTCGACGT GGTCGGCAAC ATCCCGTGGT CGCTGACCTC GGCCGTGGTC
CGATGGTGTC TGGCTGCGCC GGGCCTACGC GCGGCCACCC TGCTCACCCA ACTCGAGTAC
GCCCGCAAGC GCAGCGGTGA CTACGGGCGG TGGACGCGGT TGACCGTGCG TAGCTGGCCG
GAGTTCAGCT GGCGGCTGGC CGGGAGGGTA CCCCGTACGG CGTTCCGTCC GACACCGCGG
GTGGACGCCG GCATCCTGCG TATCGAGCGC CGCCGGGAGC CGCTGCTGCC GGTGGCGGCT
CTGCCCGCGT ACCGCCGGAT GGTCGAGTTG GGCTTCGACG GCGTTGGCGG CTCGCTCGCG
GCATCACTGG GCCGCCGCCA TCCACGGGTG CGAGTGGCGG CGGCGTTGCG CGCGACTCGA
CTCGATCCGG CGCCCCCGGT CGGTCAGGTC TGGCCGGAGC AGTGGCTGGC GCTGTTCCGC
CTGCTACGCC CTTCGTGA
|
|---|
| Protein sequence | MAPRRTRVTE RDRSRRVLSQ NFLVDPAAVN RLTRAAQPDP DRLLLEVGAG RGQLTRLLAA
RSRHLIAYEV DPVNAAELAR SCAGLPTVTC RQADFLTASP PRAPFDVVGN IPWSLTSAVV
RWCLAAPGLR AATLLTQLEY ARKRSGDYGR WTRLTVRSWP EFSWRLAGRV PRTAFRPTPR
VDAGILRIER RREPLLPVAA LPAYRRMVEL GFDGVGGSLA ASLGRRHPRV RVAAALRATR
LDPAPPVGQV WPEQWLALFR LLRPS
|
|---|
| |