Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3664 |
Symbol | |
ID | 5060140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 4202510 |
End bp | 4203058 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640475920 |
Product | regulatory protein, TetR |
Protein accession | YP_001160473 |
Protein GI | 145596176 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACGGG CGGTGCCCGA ACGGCATGAC AACATTCTCG CGGCGGCGGG GCGACGGTTT GCGCAATCCG GCTACCGGGG CACGTCGTTA CAGGACATCG CGGCAGACGT GGGCTGTTCG AAGGCGGCGG TGCTCTACCA CTTCGCCGAC AAGAAGGCCA TTCTTGCCGA ACTGGTAGCC CGGCCGATCG ACCAGCTACG GGAGCTCGAC GAACGCATCG CAGCCGCGAG CAGCCCGGCC GAGGCACAGC GGGTCGCGGC CGAGGGCTAC GTCGACCTGG CCGTCCAGTT CCGGCGCGAG ACCGCGTTCC TCCGTGGGGA GTTCCCCGGC CTGCTCGAGC ACCCTCCCTT CGACCACCTG CAACACGTCC CGGAACGGCT CGTCCGCGCC TTTGCCGGAC ACTCCGACCG CCCGGCCGCC CGGGTCGCCG CGCTGGTGGT GCTTGCGGGC ATCGCCGAGA CGTGCGGCGA ATTCATCGAT CTCCCCGATT CGGAGCTACG TCCGGCGCTA CTTGCGCTGG TCCGCCGGGC ACTCGAACCG GTCACCTGA
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Protein sequence | MTRAVPERHD NILAAAGRRF AQSGYRGTSL QDIAADVGCS KAAVLYHFAD KKAILAELVA RPIDQLRELD ERIAAASSPA EAQRVAAEGY VDLAVQFRRE TAFLRGEFPG LLEHPPFDHL QHVPERLVRA FAGHSDRPAA RVAALVVLAG IAETCGEFID LPDSELRPAL LALVRRALEP VT
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