Gene Strop_3664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3664 
Symbol 
ID5060140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4202510 
End bp4203058 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content69% 
IMG OID640475920 
Productregulatory protein, TetR 
Protein accessionYP_001160473 
Protein GI145596176 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGGG CGGTGCCCGA ACGGCATGAC AACATTCTCG CGGCGGCGGG GCGACGGTTT 
GCGCAATCCG GCTACCGGGG CACGTCGTTA CAGGACATCG CGGCAGACGT GGGCTGTTCG
AAGGCGGCGG TGCTCTACCA CTTCGCCGAC AAGAAGGCCA TTCTTGCCGA ACTGGTAGCC
CGGCCGATCG ACCAGCTACG GGAGCTCGAC GAACGCATCG CAGCCGCGAG CAGCCCGGCC
GAGGCACAGC GGGTCGCGGC CGAGGGCTAC GTCGACCTGG CCGTCCAGTT CCGGCGCGAG
ACCGCGTTCC TCCGTGGGGA GTTCCCCGGC CTGCTCGAGC ACCCTCCCTT CGACCACCTG
CAACACGTCC CGGAACGGCT CGTCCGCGCC TTTGCCGGAC ACTCCGACCG CCCGGCCGCC
CGGGTCGCCG CGCTGGTGGT GCTTGCGGGC ATCGCCGAGA CGTGCGGCGA ATTCATCGAT
CTCCCCGATT CGGAGCTACG TCCGGCGCTA CTTGCGCTGG TCCGCCGGGC ACTCGAACCG
GTCACCTGA
 
Protein sequence
MTRAVPERHD NILAAAGRRF AQSGYRGTSL QDIAADVGCS KAAVLYHFAD KKAILAELVA 
RPIDQLRELD ERIAAASSPA EAQRVAAEGY VDLAVQFRRE TAFLRGEFPG LLEHPPFDHL
QHVPERLVRA FAGHSDRPAA RVAALVVLAG IAETCGEFID LPDSELRPAL LALVRRALEP
VT